RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 Q6ZPB1 254 aaPredicted RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 GRINAQ7Z429 371 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SLC22A16Q86VW1 577 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 CYP4Z1Q86W10 505 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 MISPQ8IVT2 679 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 NRMQ8IXM6 262 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 NAXEQ8NCW5 288 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 PIK3C3Q8NEB9 887 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ROBO4Q8WZ75 1007 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 STMN2Q93045 179 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 DTNBP1Q96EV8 351 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 GPR137Q96N19 417 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 PIP5K1AQ99755 562 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 TRIM15Q9C019 465 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 STOML1Q9UBI4 398 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 CHRNA9Q9UGM1 479 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FAM215AQ9Y5M1 114 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 PTPN13Q12923 2485 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ZFHX3Q15911 3703 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 A0A1B0GVC2 190 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 TRAPPC13A5PLN9 417 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 DLGAP1O14490 977 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 CXCL13O43927 109 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 MITFO75030 526 aaPredicted RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 HPRP00739 348 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SFTPCP11686 197 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ZNF708P17019 499 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 MSX1P28360 303 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 GPR4P46093 362 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 OMPP47874 163 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ZNF41P51814 821 aaPredicted RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 TAS2R41P59536 307 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FOXF2Q12947 444 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FAM98BQ52LJ0 330 aaKnown RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 SYT14P1Q58G82 188 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FBXW10Q5XX13 1052 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 OR2T5Q6IEZ7 315 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FAM180AQ6UWF9 173 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 ZNF550Q7Z398 422 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SLC46A3Q7Z3Q1 461 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 DOLPP1Q86YN1 238 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 CLDN22Q8N7P3 220 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 OR2T29Q8NH02 315 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FNDC9Q8TBE3 224 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ABTB1Q969K4 478 aaPredicted RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 PRRC1Q96M27 445 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SFXN2Q96NB2 322 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 TUBA1CQ9BQE3 449 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ZNF559Q9BR84 538 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 PRRG4Q9BZD6 226 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 TESQ9UGI8 421 aaKnown RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 OAZ3Q9UMX2 235 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SLC9A8Q9Y2E8 581 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 A0A1W2PRQ8 180 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SH3PXD2BA1X283 911 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 MS4A18H0YCH9 400 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SOCS2O14508 198 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 EIF1AYO14602 144 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 ADAMDEC1O15204 470 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 CLOCKO15516 846 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 KLF4O43474 513 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 CHP2O43745 196 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 FMO6PO60774 539 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 AKR7A3O95154 331 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 CH25HO95992 272 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 GPIP06744 558 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 GP1BBP13224 206 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 DIO1P49895 249 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 H3F3AP84243 136 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SPIBQ01892 262 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SRSF1Q07955 248 aaKnown RBP eCLIP3.6□□□□□ -1.83
LIG4-201ENST00000356922 DGCR6Q14129 220 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SGCBQ16585 318 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 MS4A18Q3C1V0 323 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ZNF613Q6PF04 617 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 RPTNQ6XPR3 784 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 THSD4Q6ZMP0 1018 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 IGFN1Q86VF2 1251 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 KIF18BQ86Y91 864 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OFCC1Q8IZS5 231 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TMEM99Q8N816 258 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OR4K5Q8NGD3 323 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OR10D3Q8NH80 312 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 ABHD3Q8WU67 409 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TMEM239Q8WW34 195 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 RASSF5Q8WWW0 418 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OSTF1Q92882 214 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SLC25A36Q96CQ1 311 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 WBP1Q96G27 269 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 FAM46AQ96IP4 442 aaKnown RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 MRGPRX4Q96LA9 322 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 RAB3IPQ96QF0 476 aaPredicted RBP3.6□□□□□ -1.83
LIG4-201ENST00000356922 ALPK1Q96QP1 1244 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 OR5B2Q96R09 309 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 FEVQ99581 238 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 CIB1Q99828 191 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 SH3GL3Q99963 347 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 PLA2G12AQ9BZM1 189 aa3.6□□□□□ -1.83
LIG4-201ENST00000356922 TRIM2Q9C040 744 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms