RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 PODNL1Q6PEZ8 512 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 NDUFAF7Q7L592 441 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 LACC1Q8IV20 430 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 FRMD1Q8N878 549 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 CPEB3Q8NE35 698 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 ITFG2Q969R8 447 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 ZNF597Q96LX8 424 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 WDR83Q9BRX9 315 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 TREX1Q9NSU2 369 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 SPHK1Q9NYA1 384 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 MYEF2Q9P2K5 600 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 ARPC4-TTLL3A0A0A6YYG9 625 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 TMEM221A6NGB7 291 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 CLDN24A6NM45 220 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 ZNF814B7Z6K7 855 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 BOLA2-SMG1P6H3BVE0 249 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 AQP9O43315 295 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 LCMT2O60294 686 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 TPPPO94811 219 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 HLA-AP01891 365 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 CDK4P11802 303 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 RAB6AP20340 208 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 ENPP1P22413 925 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 AOAHP28039 575 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 PSMB10P40306 273 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 HNRNPFP52597 415 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 ZNF133P52736 654 aaPredicted RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 LBX1P52954 281 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 PLA2G7Q13093 441 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 FGFBP1Q14512 234 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 C17orf99Q6UX52 265 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 AAED1Q7RTV5 226 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 SCD5Q86SK9 330 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 IGFN1Q86VF2 1251 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 FAM217AQ8IXS0 508 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 METTL4Q8N3J2 472 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 KCNG3Q8TAE7 436 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 UBTD2Q8WUN7 234 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 SLC46A1Q96NT5 459 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 SLC38A1Q9H2H9 487 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 ISYNA1Q9NPH2 558 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 OLAHQ9NV23 265 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 KCND3Q9UK17 655 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 ETV7Q9Y603 341 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 TRAV27A0A087WT01 109 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 MBLAC1A4D2B0 266 aaPredicted RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 YY2O15391 372 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 FBXO45P0C2W1 286 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 JAG1P78504 1218 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 KCNJ10P78508 379 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 CTBSQ01459 385 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 MGAT3Q09327 533 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 ZNF74Q16587 644 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 SLC35G1Q2M3R5 365 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 ZFP82Q8N141 532 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 SVBPQ8N300 66 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 CORO2AQ92828 525 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 CPNE4Q96A23 557 aaPredicted RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 ZNF486Q96H40 463 aaPredicted RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 SGPP1Q9BX95 441 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 FAM212BQ9NTI7 297 aaPredicted RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 OR14J1Q9UGF5 321 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 PGAP2Q9UHJ9 254 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 ZNF225Q9UK10 706 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 MYADML2A6NDP7 307 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 KLRC4-KLRK1H3BQV0 150 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 K7EPK0 472 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 DDAH2O95865 285 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 NUDT7P0C024 238 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 DHRS4L1P0CG22 281 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 GABRA5P31644 462 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 GMPRP36959 345 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 RPS23P62266 143 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 C17orf67Q0P5P2 114 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 TNK1Q13470 666 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 EXOSC7Q15024 291 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 GTDC1Q4AE62 458 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 CTSL3PQ5NE16 218 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 LDLRAD1Q5T700 205 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 HENMT1Q5T8I9 393 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 FAM180BQ6P0A1 224 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 BPIFB2Q8N4F0 458 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 FAM71E2Q8N5Q1 922 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 PPA2Q9H2U2 334 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 SLCO5A1Q9H2Y9 848 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 STARD5Q9NSY2 213 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 NPAP1Q9NZP6 1156 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 PISDQ9UG56 409 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 RASD1Q9Y272 281 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 NPIPA5A0A0B4J1W7 369 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ZNF587BE7ETH6 402 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 NPIPA7E9PJI5 369 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 GPR171O14626 319 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 OR2T7P0C7T2 308 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 METTL15P1P0C7V9 234 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 NPIPA8P0DM63 369 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 ARAFP10398 606 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 FCGR2AP12318 317 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 AKR1C1Q04828 323 aa6.02□□□□□ -1.45
UPF2-201ENST00000356352 SPOCK1Q08629 439 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms