RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RBM48Q5RL73 367 aaKnown RBP14.11□□□□□ -0.15
CTSA-202ENST00000354880 FAM69AQ5T7M9 428 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 C1QL3Q5VWW1 255 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 LAIR2Q6ISS4 152 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 THSD4Q6ZMP0 1018 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 OR8J1Q8NGP2 316 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 OR4Q3Q8NH05 313 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 APH1BQ8WW43 257 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 HAS2Q92819 552 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 DDIT4LQ96D03 193 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 FAM173AQ9BQD7 235 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 PTDSS2Q9BVG9 487 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 PRRG3Q9BZD7 231 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 OR11A1Q9GZK7 315 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 ENKD1Q9H0I2 346 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 UBQLN3Q9H347 655 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 FKRPQ9H9S5 495 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 SERINC1Q9NRX5 453 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 TUBA8Q9NY65 449 aaPredicted RBP14.11□□□□□ -0.15
CTSA-202ENST00000354880 SCOCQ9UIL1 159 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 KCNMB2Q9Y691 235 aa14.11□□□□□ -0.15
CTSA-202ENST00000354880 LRRC3CA6NJW4 275 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 EFNA2O43921 213 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 SMNDC1O75940 238 aaKnown RBP eCLIP14.1□□□□□ -0.15
CTSA-202ENST00000354880 AHSA1O95433 338 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 MT-ATP6P00846 226 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 BGLAPP02818 100 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 ASAH2BP0C7U1 165 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 HK1P19367 917 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 CXCR4P61073 352 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 RPS4XP62701 263 aaKnown RBP14.1□□□□□ -0.15
CTSA-202ENST00000354880 ARG2P78540 354 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 FOXK1P85037 733 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 SNAPC1Q16533 368 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.1□□□□□ -0.15
CTSA-202ENST00000354880 PGGHGQ32M88 737 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 KCTD21Q4G0X4 260 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 C3orf33Q6P1S2 294 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 CCDC103Q8IW40 242 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 SLC43A2Q8N370 569 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 GTPBP8Q8N3Z3 284 aaPredicted RBP14.1□□□□□ -0.15
CTSA-202ENST00000354880 MDS2Q8NDY4 140 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 SLC38A2Q96QD8 506 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 POLDIP3Q9BY77 421 aaKnown RBP14.1□□□□□ -0.15
CTSA-202ENST00000354880 HES7Q9BYE0 225 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 ZFP64Q9NPA5 681 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 ZNF229Q9UJW7 825 aa14.1□□□□□ -0.15
CTSA-202ENST00000354880 BOKQ9UMX3 212 aaPredicted RBP14.1□□□□□ -0.15
CTSA-202ENST00000354880 SPIN1Q9Y657 262 aaPredicted RBP14.1□□□□□ -0.15
CTSA-202ENST00000354880 SLC1A7O00341 560 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 BHLHE40O14503 412 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 OR2T1O43869 369 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 NDUFB2O95178 105 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 CCDC159P0C7I6 412 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 IL11P20809 199 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 CRHBPP24387 322 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 SRD5A2P31213 254 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 FMO3P31513 532 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 SLC6A6P31641 620 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 PCYT1AP49585 367 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 PRPS1P60891 318 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 SNRPGP62308 76 aaKnown RBP14.09□□□□□ -0.15
CTSA-202ENST00000354880 TEKQ02763 1124 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 FOXO1Q12778 655 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 TOP3AQ13472 1001 aaPredicted RBP14.09□□□□□ -0.15
CTSA-202ENST00000354880 ANKDD1AQ495B1 522 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 TCEANCQ8N8B7 351 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 BPIFB6Q8NFQ5 453 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 OR2M7Q8NG81 312 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 OR5M1Q8NGP8 315 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 ZNF566Q969W8 418 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 DNAJA3Q96EY1 480 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 IL4I1Q96RQ9 567 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 IFT27Q9BW83 186 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 BLOC1S6Q9UL45 172 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 RPH3AQ9Y2J0 694 aaPredicted RBP14.09□□□□□ -0.15
CTSA-202ENST00000354880 SSUH2Q9Y2M2 353 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 HIF3AQ9Y2N7 669 aa14.09□□□□□ -0.15
CTSA-202ENST00000354880 KLF13Q9Y2Y9 288 aaPredicted RBP14.09□□□□□ -0.15
CTSA-202ENST00000354880 PINLYPA6NC86 204 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 H3BML4 177 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 BLOC1S5-TXNDC5H3BN57 136 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 ZIC3O60481 467 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 HIST1H2ABP04908 130 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 HMGN1P05114 100 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 SP1P08047 785 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 FKBP2P26885 142 aaKnown RBP14.08□□□□□ -0.15
CTSA-202ENST00000354880 SELENBP1Q13228 472 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 SMN1Q16637 294 aaKnown RBP14.08□□□□□ -0.15
CTSA-202ENST00000354880 SYT14P1Q58G82 188 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 RAET1LQ5VY80 246 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 SLC25A25Q6KCM7 469 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 TMEM154Q6P9G4 183 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 HIST3H2AQ7L7L0 130 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 MAMDC2Q7Z304 686 aaPredicted RBP14.08□□□□□ -0.15
CTSA-202ENST00000354880 SULF2Q8IWU5 870 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 LNX2Q8N448 690 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 ATP6V1C2Q8NEY4 427 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 OR6S1Q8NH40 331 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 HIST1H2ACQ93077 130 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms