RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TCTN1Q2MV58 587 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 PIP5KL1Q5T9C9 394 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 LIN54Q6MZP7 749 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 JMJD6Q6NYC1 403 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC16A13Q7RTY0 426 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 OR2W3Q7Z3T1 314 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF740Q8NDX6 193 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 OR56A1Q8NGH5 318 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 OR13C5Q8NGS8 318 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 THAP6Q8TBB0 222 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 RXFP4Q8TDU9 374 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 C2CD4CQ8TF44 421 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 RAB40AQ8WXH6 277 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 AUTS2Q8WXX7 1259 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 PHYHIPQ92561 330 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC25A28Q96A46 364 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF707Q96C28 371 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 TCEAL7Q9BRU2 100 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 CRB3Q9BUF7 120 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 MRI1Q9BV20 369 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 ZDHHC5Q9C0B5 715 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 NRIP3Q9NQ35 241 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC22A11Q9NSA0 550 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF629Q9UEG4 869 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 IL20RAQ9UHF4 553 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 FOXJ3Q9UPW0 622 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 PRKAB1Q9Y478 270 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 ZC3H12DA2A288 527 aaKnown RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 CPSF4LA6NMK7 179 aaKnown RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 NUDT19A8MXV4 375 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 IMPA2O14732 288 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 BCL2L11O43521 198 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 OR2F2O95006 317 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 FGF19O95750 216 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 TBX6O95947 436 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 IGHV2-70P01814 119 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 LRG1P02750 347 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 NTSP30990 170 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 PTGFRP43088 359 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 FNTBP49356 437 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 PPP2CBP62714 309 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 PPP2CAP67775 309 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 MEF2AQ02078 507 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 OC90Q02509 493 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 FUT5Q11128 374 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 OR2F1Q13607 317 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM35AQ53FP2 167 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 FAAP20Q6NZ36 180 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 C3orf33Q6P1S2 294 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 RPTNQ6XPR3 784 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 MBOAT2Q6ZWT7 520 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 SYT9Q86SS6 491 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF546Q86UE3 836 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM25Q86YD3 366 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 TRAPPC5Q8IUR0 188 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 ZFPM2Q8WW38 1151 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 IRF7Q92985 503 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 MRGPRX3Q96LB0 322 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 SAMD8Q96LT4 415 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 AMDHD1Q96NU7 426 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 C1QTNF2Q9BXJ5 285 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 KRCC1Q9NPI7 259 aaPredicted RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 PRDM9Q9NQV7 894 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 TRPC4Q9UBN4 977 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 PCDHB10Q9UN67 800 aa9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 AK6Q9Y3D8 172 aaKnown RBP9.52□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM272A0A1B0GTI8 110 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 KANTRA0A1W2PQU2 76 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 ANTXRLA6NF34 631 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 C5orf52A6NGY3 159 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 NDUFS4O43181 175 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 CLEC3AO75596 197 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 HTR3BO95264 441 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 PAPLNO95428 1278 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 NTN1O95631 604 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 SBK2P0C263 348 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 ZGLP1P0C6A0 271 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 PAX6P26367 422 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 HTR2AP28223 471 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 OR12D2P58182 307 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 RAB5BP61020 215 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 ACTC1P68032 377 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 ACTA1P68133 377 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 TLE2Q04725 743 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 CBFBQ13951 182 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 FAM109BQ6ICB4 259 aaPredicted RBP9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 UNQ9370/PRO34162Q6UXP9 181 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 USP53Q70EK8 1073 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 NKAIN4Q8IVV8 208 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 MUC20Q8N307 709 aaPredicted RBP9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 OR1S2Q8NGQ3 325 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 OR5J2Q8NH18 312 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC2A12Q8TD20 617 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 EXOSC8Q96B26 276 aaKnown RBP9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 OTUB2Q96DC9 234 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 SMIM19Q96E16 107 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 S100A16Q96FQ6 103 aaKnown RBP9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 DERL3Q96Q80 235 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 F2RL3Q96RI0 385 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC46A2Q9BY10 475 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms