RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SEC14L4Q9UDX3 406 aa14.79□□□□□ -0.04
HPS1-202ENST00000338546 A8MVM7 634 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 ETV2O00321 342 aaPredicted RBP14.78□□□□□ -0.04
HPS1-202ENST00000338546 SOCS6O14544 535 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 ZNF354AO60765 605 aaPredicted RBP14.78□□□□□ -0.04
HPS1-202ENST00000338546 NPIPB7O75200 414 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 SLC25A12O75746 678 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 DKK1O94907 266 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 NUDT14O95848 222 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 DLGAP3O95886 979 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 HIST1H2ABP04908 130 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 LIMS3P0CW19 117 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 LIMS4P0CW20 117 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 CPEP16870 476 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 SLC2A5P22732 501 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 NR4A1P22736 598 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 PSMA1P25786 263 aaKnown RBP14.78□□□□□ -0.04
HPS1-202ENST00000338546 ATP6V1E1P36543 226 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 RPL4P36578 427 aaKnown RBP14.78□□□□□ -0.04
HPS1-202ENST00000338546 LGALS3BPQ08380 585 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 SNTA1Q13424 505 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 TPBGQ13641 420 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 SF3A2Q15428 464 aaKnown RBP14.78□□□□□ -0.04
HPS1-202ENST00000338546 COL28A1Q2UY09 1125 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 BTBD16Q32M84 506 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 NDUFAF7Q7L592 441 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 HIST3H2AQ7L7L0 130 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 LRRC17Q8N6Y2 441 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 HIST1H2ACQ93077 130 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 SECISBP2Q96T21 854 aaKnown RBP14.78□□□□□ -0.04
HPS1-202ENST00000338546 PHOX2BQ99453 314 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 TEAD3Q99594 435 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 NDUFB11Q9NX14 153 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 HS3ST3B1Q9Y662 390 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 A3GALT2U3KPV4 340 aa14.78□□□□□ -0.04
HPS1-202ENST00000338546 TMED7-TICAM2A0A0A6YYA0 188 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 FAM183AA6NL82 134 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 MCIDASD6RGH6 385 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 LRP3O75074 770 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 TXNDC12O95881 172 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 CD14P08571 375 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 UQCRC1P31930 480 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 NCS1P62166 190 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 IL10RAQ13651 578 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 CRMP1Q14194 572 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 SSX1Q16384 188 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 SLC35D3Q5M8T2 416 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 LCN1P1Q5VSP4 162 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 ARMC10Q8N2F6 343 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 KLHL36Q8N4N3 616 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 ACBD7Q8N6N7 88 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 C10orf53Q8N6V4 93 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 LRRC75AQ8NAA5 344 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 SUMF1Q8NBK3 374 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 ZNF485Q8NCK3 441 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 THAP3Q8WTV1 239 aaPredicted RBP14.77□□□□□ -0.04
HPS1-202ENST00000338546 KISS1RQ969F8 398 aaPredicted RBP14.77□□□□□ -0.04
HPS1-202ENST00000338546 ZNF524Q96C55 264 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 SPACA9Q96E40 222 aaPredicted RBP14.77□□□□□ -0.04
HPS1-202ENST00000338546 ARHGAP9Q9BRR9 750 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 SPRY4Q9C004 299 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 CPNE5Q9HCH3 593 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 ERVK13-1Q9NX77 482 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 CAB39Q9Y376 341 aaPredicted RBP14.77□□□□□ -0.04
HPS1-202ENST00000338546 TMED7Q9Y3B3 224 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 IER3IP1Q9Y5U9 82 aa14.77□□□□□ -0.04
HPS1-202ENST00000338546 CCDC187A0A096LP49 1063 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 CCDC182A6NF36 153 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 TP53I11O14683 189 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 OR2T1O43869 369 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 OR2J2O76002 312 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 BGLAPP02818 100 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 JMJD7P0C870 316 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 ICAM2P13598 275 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 APOBEC1P41238 236 aaKnown RBP14.77□□□□□ -0.05
HPS1-202ENST00000338546 ACTC1P68032 377 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 ACTA1P68133 377 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 BDH1Q02338 343 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 TOMM34Q15785 309 aaPredicted RBP14.77□□□□□ -0.05
HPS1-202ENST00000338546 GPR139Q6DWJ6 353 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 OPN5Q6U736 354 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 TMPRSS11AQ6ZMR5 421 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 C16orf47Q6ZP98 133 aaPredicted RBP14.77□□□□□ -0.05
HPS1-202ENST00000338546 MAMDC2Q7Z304 686 aaPredicted RBP14.77□□□□□ -0.05
HPS1-202ENST00000338546 ADGRG3Q86Y34 549 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 OR4F15Q8NGB8 312 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 OR52E2Q8NGJ4 325 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 NDNFQ8TB73 568 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 RPL3LQ92901 407 aaKnown RBP14.77□□□□□ -0.05
HPS1-202ENST00000338546 OTULINQ96BN8 352 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 KTI12Q96EK9 354 aaPredicted RBP14.77□□□□□ -0.05
HPS1-202ENST00000338546 RASL10BQ96S79 203 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 DDOQ99489 341 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 ZNF649Q9BS31 505 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 B3GNT4Q9C0J1 378 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 DCSTAMPQ9H295 470 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 STUB1Q9UNE7 303 aa14.77□□□□□ -0.05
HPS1-202ENST00000338546 YARS2Q9Y2Z4 477 aaKnown RBP14.77□□□□□ -0.05
HPS1-202ENST00000338546 LRRN3E7EW58 273 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms