RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CLDN23Q96B33 292 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 MED30Q96HR3 178 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF285Q96NJ3 590 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 KATNB1Q9BVA0 655 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 ALG8Q9BVK2 526 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 TEX12Q9BXU0 123 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 NEK6Q9HC98 313 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 PRDM9Q9NQV7 894 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 ASB6Q9NWX5 421 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 STUB1Q9UNE7 303 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 EP300Q09472 2414 aaPredicted RBP11.51□□□□□ -0.57
LIMK1-201ENST00000336180 MRPS14O60783 128 aaKnown RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 HAAOP46952 286 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 INPP5JQ15735 1006 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 GARNL3Q5VVW2 1013 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 CROCCP3Q8IVE0 287 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF511Q8NB15 262 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 TEAD3Q99594 435 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 COQ7Q99807 217 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 G6PC3Q9BUM1 346 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 OR11A1Q9GZK7 315 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 PPIL3Q9H2H8 161 aaKnown RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 SRA1Q9HD15 236 aaKnown RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 A0A1W2PRG6 482 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 RIIAD1A6NNX1 92 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 H0YIG0 161 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 CASKO14936 926 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 SELENOFO60613 162 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 SULT1C4O75897 302 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 DLGAP3O95886 979 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 TACR3P29371 465 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 TNFSF8P32971 234 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 MLLT11Q13015 90 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 FHL1Q13642 323 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 C17orf47Q8NEP4 570 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 UFD1Q92890 307 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 KRCC1Q9NPI7 259 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 SACM1LQ9NTJ5 587 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 NDUFB11Q9NX14 153 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 NOSIPQ9Y314 301 aaKnown RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 SLC6A5Q9Y345 797 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 LOC400499M0QZD8 3231 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 IGKV1D-42A0A075B6H8 117 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 TEX13CA0A0J9YWL9 993 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 FAM86C2PA6NEL3 165 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 TVP23AA6NH52 213 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 NPIPB9F8W1W9 429 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 RCBTB2O95199 551 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 AK1P00568 194 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 AHCYP23526 432 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 HTR1FP30939 366 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 RORAP35398 523 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 SOX6P35712 828 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 IGLV3-21P80748 117 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF117Q03924 483 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF613Q6PF04 617 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 ULK3Q6PHR2 472 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 MEPCEQ7L2J0 689 aaKnown RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 D2HGDHQ8N465 521 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 OR5J2Q8NH18 312 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 KISS1RQ969F8 398 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 SGTBQ96EQ0 304 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 COX4I2Q96KJ9 171 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 C4orf36Q96KX1 117 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 TRIM2Q9C040 744 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 SMURF1Q9HCE7 757 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 MKKSQ9NPJ1 570 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-201ENST00000336180 CFL2Q9Y281 166 aa11.5□□□□□ -0.57
LIMK1-201ENST00000336180 A0A1B0GX78 115 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 ANKRD61A6NGH8 418 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 HMGN1P05114 100 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 CELA2AP08217 269 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 EPHA8P29322 1005 aaPredicted RBP11.49□□□□□ -0.57
LIMK1-201ENST00000336180 FBXW4P57775 412 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 TEKQ02763 1124 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 LTBQ06643 244 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 TOMM20Q15388 145 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 CCDC58Q4VC31 144 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 C3orf38Q5JPI3 329 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 NXNL2Q5VZ03 156 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 OR5M1Q8NGP8 315 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 GPR119Q8TDV5 335 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 DUSP19Q8WTR2 217 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 LCORQ96JN0 433 aaPredicted RBP11.49□□□□□ -0.57
LIMK1-201ENST00000336180 WDR12Q9GZL7 423 aaKnown RBP11.49□□□□□ -0.57
LIMK1-201ENST00000336180 ANKRD19PQ9H560 264 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 RPRD1BQ9NQG5 326 aaKnown RBP11.49□□□□□ -0.57
LIMK1-201ENST00000336180 A0A1W2PQL4 384 aaPredicted RBP11.49□□□□□ -0.57
LIMK1-201ENST00000336180 DOK2O60496 412 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 HCN1O60741 890 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 PTP4A3O75365 173 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 SCRG1O75711 98 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
LIMK1-201ENST00000336180 SNTA1Q13424 505 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 DSG2Q14126 1118 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 EBPQ15125 230 aaKnown RBP11.49□□□□□ -0.57
LIMK1-201ENST00000336180 KLHL26Q53HC5 615 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF600Q6ZNG1 722 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 LURAP1LQ8IV03 231 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 LNX2Q8N448 690 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms