RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 C1orf140Q5VVS0 124 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 TMPRSS11FQ6ZWK6 438 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 TRILQ7L0X0 811 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 SLC46A3Q7Z3Q1 461 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 SIAH3Q8IW03 269 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 PACRGLQ8N7B6 248 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 TSPAN10Q9H1Z9 355 aaPredicted RBP19.38■□□□□ 0.69
TPM1-204ENST00000334895 KIF17Q9P2E2 1029 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 CHD6Q8TD26 2715 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 TFECO14948 347 aaPredicted RBP19.37■□□□□ 0.69
TPM1-204ENST00000334895 ATXN7O15265 892 aaPredicted RBP19.37■□□□□ 0.69
TPM1-204ENST00000334895 IFNGR2P38484 337 aa19.37■□□□□ 0.69
TPM1-204ENST00000334895 RPS5P46782 204 aaKnown RBP19.37■□□□□ 0.69
TPM1-204ENST00000334895 INAQ16352 499 aa19.37■□□□□ 0.69
TPM1-204ENST00000334895 KLHL17Q6TDP4 642 aa19.37■□□□□ 0.69
TPM1-204ENST00000334895 GNPDA2Q8TDQ7 276 aa19.37■□□□□ 0.69
TPM1-204ENST00000334895 SGTBQ96EQ0 304 aa19.37■□□□□ 0.69
TPM1-204ENST00000334895 MOGAT1Q96PD6 335 aa19.37■□□□□ 0.69
TPM1-204ENST00000334895 TRAV36DV7A0A075B6V5 113 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 CH25HO95992 272 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 BGLAPP02818 100 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 IGFBP5P24593 272 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 FPR3P25089 353 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 SFTPDP35247 375 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 STARP49675 285 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 RAC1P63000 192 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 ZNF74Q16587 644 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.36■□□□□ 0.699e-6■■■■□ 24.9
TPM1-204ENST00000334895 GALNT5Q7Z7M9 940 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 LRRC17Q8N6Y2 441 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 SLC25A43Q8WUT9 341 aaPredicted RBP19.36■□□□□ 0.69
TPM1-204ENST00000334895 DDIT4LQ96D03 193 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 WBP1Q96G27 269 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 C8orf4Q9NR00 106 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 REV1Q9UBZ9 1251 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 TMEM5Q9Y2B1 443 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 SPIN1Q9Y657 262 aaPredicted RBP19.36■□□□□ 0.69
TPM1-204ENST00000334895 DNAJC13O75165 2243 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 TP53P04637 393 aaPredicted RBP19.36■□□□□ 0.69
TPM1-204ENST00000334895 IMPDH2P12268 514 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 CHMP24386 653 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 AQP4P55087 323 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 TSPAN31Q12999 210 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 TMEM176BQ3YBM2 270 aaPredicted RBP19.36■□□□□ 0.69
TPM1-204ENST00000334895 CD300LDQ6UXZ3 194 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 GGNQ86UU5 652 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 POTEKPQ9BYX7 375 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 UCK2Q9BZX2 261 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 VCX3BQ9H321 246 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 KRT84Q9NSB2 600 aa19.36■□□□□ 0.69
TPM1-204ENST00000334895 PRRC2CQ9Y520 2896 aaKnown RBP19.35■□□□□ 0.69
TPM1-204ENST00000334895 A0A1W2PNR3 127 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 FTCDNL1E5RQL4 147 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 OR7A10O76100 309 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 AHSA1O95433 338 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 IGHG3P01860 377 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 TFPIP10646 304 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 CLDN20P56880 219 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 ALDH6A1Q02252 535 aaKnown RBP19.35■□□□□ 0.69
TPM1-204ENST00000334895 MYBPHQ13203 477 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 FHL1Q13642 323 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 C5orf46Q6UWT4 87 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 IZUMO2Q6UXV1 221 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 OR13C2Q8NGS9 318 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 NEIL3Q8TAT5 605 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 SMPDL3BQ92485 455 aa19.35■□□□□ 0.69
TPM1-204ENST00000334895 KRCC1Q9NPI7 259 aaPredicted RBP19.35■□□□□ 0.69
TPM1-204ENST00000334895 PAPOLBQ9NRJ5 636 aaKnown RBP19.35■□□□□ 0.69
TPM1-204ENST00000334895 COL6A6A6NMZ7 2263 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 EFCAB9A8MZ26 197 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 H0YC42 278 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 SNAP29O95721 258 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 IGFBP1P08833 259 aaPredicted RBP19.34■□□□□ 0.69
TPM1-204ENST00000334895 SFTPCP11686 197 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 CLK1P49759 484 aaKnown RBP19.34■□□□□ 0.69
TPM1-204ENST00000334895 LHX2P50458 406 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 TPD52P55327 224 aaPredicted RBP19.34■□□□□ 0.69
TPM1-204ENST00000334895 CLDN15P56746 228 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 IL1RL1Q01638 556 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 CTU2Q2VPK5 515 aaKnown RBP19.34■□□□□ 0.69
TPM1-204ENST00000334895 FAM69AQ5T7M9 428 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 KIF18BQ86Y91 864 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 LIPHQ8WWY8 451 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 OR5B2Q96R09 309 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 TACO1Q9BSH4 297 aaKnown RBP19.34■□□□□ 0.69
TPM1-204ENST00000334895 SLC25A18Q9H1K4 315 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 ZNF556Q9HAH1 456 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 SPRR3Q9UBC9 169 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 POFUT2Q9Y2G5 429 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 AP4B1Q9Y6B7 739 aa19.34■□□□□ 0.69
TPM1-204ENST00000334895 SMG1Q96Q15 3661 aaKnown RBP19.34■□□□□ 0.69
TPM1-204ENST00000334895 TRGV5A0A0B4J1U4 118 aa19.33■□□□□ 0.69
TPM1-204ENST00000334895 A0A0J9YW62 118 aa19.33■□□□□ 0.69
TPM1-204ENST00000334895 HTR3EA5X5Y0 456 aa19.33■□□□□ 0.69
TPM1-204ENST00000334895 LINC01387J3KSC0 135 aa19.33■□□□□ 0.69
TPM1-204ENST00000334895 FZD7O75084 574 aa19.33■□□□□ 0.69
TPM1-204ENST00000334895 ASAH2BP0C7U1 165 aa19.33■□□□□ 0.69
TPM1-204ENST00000334895 SAGP10523 405 aaPredicted RBP19.33■□□□□ 0.69
TPM1-204ENST00000334895 BMP7P18075 431 aa19.33■□□□□ 0.69
TPM1-204ENST00000334895 POU3F2P20265 443 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms