RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 TAF8Q7Z7C8 310 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 LSMEM1Q8N8F7 131 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 GATSQ8NAP1 163 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 DEDD2Q8WXF8 326 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 GCDHQ92947 438 aaPredicted RBP12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 RASD2Q96D21 266 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 C14orf105Q9NVL8 296 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 PCDH15Q96QU1 1955 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 IGHV4-34P06331 123 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 ANKRD34CP0C6C1 535 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 CT45A8P0DMV1 189 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 CT45A9P0DMV2 189 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 EPXP11678 715 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 MAOAP21397 527 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 CT45A2Q5DJT8 189 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 TIGD3Q6B0B8 471 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 TMEM184AQ6ZMB5 413 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 TPRA1Q86W33 373 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 GRAMD2AQ8IUY3 354 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 LIX1LQ8IVB5 337 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 ZNF655Q8N720 491 aaPredicted RBP12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 YIPF5Q969M3 257 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 ZNF524Q96C55 264 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 RBM18Q96H35 190 aaKnown RBP12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 LMF2Q9BU23 707 aaKnown RBP12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 TRIM2Q9C040 744 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 POT1Q9NUX5 634 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 GNG8Q9UK08 70 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 ENTPD2Q9Y5L3 495 aa12.31□□□□□ -0.44
TUBA1B-201ENST00000332858 CCR6P51684 374 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 SIRPAP78324 504 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 CDK5R1Q15078 307 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 ARHGAP11AQ6P4F7 1023 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 AKAP1Q92667 903 aaKnown RBP eCLIP12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 TSSK2Q96PF2 358 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 DERL3Q96Q80 235 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 KLHDC3Q9BQ90 382 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 GSDMCQ9BYG8 508 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 BRD7Q9NPI1 651 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 C2orf42Q9NWW7 574 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 ING3Q9NXR8 418 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 ICAM5Q9UMF0 924 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 HSPB11Q9Y547 144 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 OR5K3A6NET4 321 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 CENPBD1B2RD01 187 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 TNFP01375 233 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 AKT2P31751 481 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 RPL4P36578 427 aaKnown RBP12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 ERVK-25P63136 954 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 HHEXQ03014 270 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 STX4Q12846 297 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 TNK1Q13470 666 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 STPG1Q5TH74 334 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 ULK3Q6PHR2 472 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 SIAH3Q8IW03 269 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 NPEPL1Q8NDH3 523 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 SMIM19Q96E16 107 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 CDCA3Q99618 268 aaPredicted RBP12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 FBRSQ9HAH7 460 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 ANKRD10Q9NXR5 420 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 RP1P56715 2156 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 TRBV2A0A0J9YWF9 115 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 NPIPB9F8W1W9 429 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 OGG1O15527 345 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 FABP7O15540 132 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 NDUFB2O95178 105 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 VAMP1P23763 118 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 GIFP27352 417 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 LBX1P52954 281 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 TAS2R43P59537 309 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 FGFBP1Q14512 234 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 ALKBH2Q6NS38 261 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 SLC35F2Q8IXU6 374 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 MS4A15Q8N5U1 240 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 OR11H7Q8NGC8 314 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 OR6K6Q8NGW6 343 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 C16orf52Q8NHV5 167 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 SNX33Q8WV41 574 aa12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 TMEM184BQ9Y519 407 aaPredicted RBP12.3□□□□□ -0.44
TUBA1B-201ENST00000332858 VPS13AQ96RL7 3174 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 A0A1B0GVT2 93 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 PIN1P1O15428 100 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 OR2B3O76000 313 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 SEMA4FO95754 770 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 IFNGP01579 166 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 CXCL3P19876 107 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 GNALP38405 381 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 HTR2BP41595 481 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 YPEL5P62699 121 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 HTR4Q13639 388 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 SMUG1Q53HV7 270 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 MANEAQ5SRI9 462 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 THOC7Q6I9Y2 204 aaKnown RBP12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 PYHIN1Q6K0P9 492 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 PARGQ86W56 976 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 BEST4Q8NFU0 473 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 MOSPD2Q8NHP6 518 aa12.29□□□□□ -0.44
TUBA1B-201ENST00000332858 SNAPC3Q92966 411 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms