RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 STARP49675 285 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 PDX1P52945 283 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 SIRPAP78324 504 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 PRR5P85299 388 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 MANEAQ5SRI9 462 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF793Q6ZN11 406 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 OR2W3Q7Z3T1 314 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 CCDC116Q8IYX3 515 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 CMTM8Q8IZV2 173 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ARL14Q8N4G2 192 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 BOLLQ8N9W6 283 aaKnown RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 OR56A1Q8NGH5 318 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 OR4C16Q8NGL9 310 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 SLC2A12Q8TD20 617 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 GLYATL2Q8WU03 294 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 HAVCR1Q96D42 359 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 CNRIP1Q96F85 164 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 AICDAQ9GZX7 198 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 PELI2Q9HAT8 420 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 KRCC1Q9NPI7 259 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 TRBV2A0A0J9YWF9 115 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF879B4DU55 563 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 RAB40ALP0C0E4 278 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF136P52737 540 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 PPIAP62937 165 aaKnown RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 TRA2BP62995 288 aaKnown RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 REEP5Q00765 189 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 OR4C11Q6IEV9 310 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 JMJD6Q6NYC1 403 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 C11orf96Q7Z7L8 435 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ARMC10Q8N2F6 343 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 C12orf45Q8N5I9 185 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF433Q8N7K0 673 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 TMIEQ8NEW7 156 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 OR13C2Q8NGS9 318 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 OR14A16Q8NHC5 309 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 TNFAIP8L1Q8WVP5 186 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 RAB40AQ8WXH6 277 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 EPHX3Q9H6B9 360 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 GAREM1Q9H706 876 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF334Q9HCZ1 680 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 SPG21Q9NZD8 308 aa11.77□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF443Q9Y2A4 671 aaPredicted RBP11.77□□□□□ -0.53
CCDC60-201ENST00000327554 CXorf51AA0A1B0GTR3 108 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 OR6C68A6NDL8 312 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 ACOD1A6NK06 481 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 FAM25EA8MYX2 175 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 WASH3PC4AMC7 463 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 CD1AP06126 327 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 CKBP12277 381 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 LAG3P18627 525 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 ITGB8P26012 769 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 CLDN2P57739 230 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 LY6G6FQ5SQ64 297 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 RPL22L1Q6P5R6 122 aaKnown RBP11.76□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF600Q6ZNG1 722 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF546Q86UE3 836 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 TRAPPC5Q8IUR0 188 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 CCDC36Q8IYA8 594 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 SYS1Q8N2H4 156 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 KCNRGQ8N5I3 272 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 OR5AR1Q8NGP9 310 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 NANPQ8TBE9 248 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 CXorf40AQ8TE69 158 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 ASB13Q8WXK3 278 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF75AQ96N20 296 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 CLDND1Q9NY35 253 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 CALML5Q9NZT1 146 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 EDARQ9UNE0 448 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 A0A0D9SG52 128 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 CTNSO60931 367 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 RCBTB2O95199 551 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 TMIGD3P0DMS9 266 aaPredicted RBP11.76□□□□□ -0.53
CCDC60-201ENST00000327554 EDNRAP25101 427 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 PSMB5P28074 263 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 MAGEB1P43366 347 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 LUMP51884 338 aaPredicted RBP11.76□□□□□ -0.53
CCDC60-201ENST00000327554 C11orf88Q6PI97 169 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 FRRS1Q6ZNA5 592 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 OR1S2Q8NGQ3 325 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 OR6N1Q8NGY5 312 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 C2CD4CQ8TF44 421 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 MYLIPQ8WY64 445 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 MIB2Q96AX9 1013 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 OR2AG1Q9H205 316 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 FKRPQ9H9S5 495 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 TMEM138Q9NPI0 162 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 SLC25A13Q9UJS0 675 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 PCDHB10Q9UN67 800 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 SIGLEC7Q9Y286 467 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 V9GY05 133 aa11.76□□□□□ -0.53
CCDC60-201ENST00000327554 TICRRQ7Z2Z1 1910 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 TRAV20A0A0B4J274 112 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 RAB19A4D1S5 217 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 RIIAD1A6NNX1 92 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 H7BY64 318 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 ADAMTS4O75173 837 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 LEFTY1O75610 366 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 GLSO94925 669 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms