RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 MXD1Q05195 221 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 TMPRSS11AQ6ZMR5 421 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 THAP3Q8WTV1 239 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-201ENST00000315286 LIPHQ8WWY8 451 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 TP53INP1Q96A56 240 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 WDR77Q9BQA1 342 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-201ENST00000315286 TPK1Q9H3S4 243 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 SMOC1Q9H4F8 434 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 SIAEQ9HAT2 523 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 NANSQ9NR45 359 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 KLHL1Q9NR64 748 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 KLHL21Q9UJP4 597 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 PEX16Q9Y5Y5 336 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 OR6C70A6NIJ9 312 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 CTDSP2O14595 271 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 ARPC3O15145 178 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 WISP1O95388 367 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 NUDT14O95848 222 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 AQP2P41181 271 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 RORCP51449 518 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 PRPS1P60891 318 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 ATP1A4Q13733 1029 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 GALEQ14376 348 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 RGS21Q2M5E4 152 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 PAPD4Q6PIY7 484 aaKnown RBP16.73■□□□□ 0.27
CCDC43-201ENST00000315286 CD200R1LQ6Q8B3 271 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 DCDC5Q6ZRR9 648 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 CENPSQ8N2Z9 138 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 ATOH1Q92858 354 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-201ENST00000315286 SPSB2Q99619 263 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 KATNB1Q9BVA0 655 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 C12orf10Q9HB07 376 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 NPFFR2Q9Y5X5 522 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 CFAP54Q96N23 3096 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 BDP1A6H8Y1 2624 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 WDFY3Q8IZQ1 3526 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 A0A075B6Q4 140 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 D6RAR5 112 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 MEN1O00255 615 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 IMPA2O14732 288 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 CALRP27797 417 aaKnown RBP16.72■□□□□ 0.27
CCDC43-201ENST00000315286 TGM4P49221 684 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 VASNQ6EMK4 673 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 POMZP3Q6PJE2 187 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 GHDCQ8N2G8 530 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 SYT14Q8NB59 555 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 DTWD2Q8NBA8 298 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 NPEPL1Q8NDH3 523 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 ATP6V1C2Q8NEY4 427 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 OR51L1Q8NGJ5 315 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 OR5W2Q8NH69 310 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 CHPT1Q8WUD6 406 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 SMPDL3BQ92485 455 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 RASD2Q96D21 266 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 KCTD7Q96MP8 289 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 LRFN5Q96NI6 719 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 NMNAT3Q96T66 252 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 DDOQ99489 341 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 TMED9Q9BVK6 235 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 INPP5EQ9NRR6 644 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 BABAM2Q9NXR7 383 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 PPIEQ9UNP9 301 aaKnown RBP16.72■□□□□ 0.27
CCDC43-201ENST00000315286 HIF3AQ9Y2N7 669 aa16.72■□□□□ 0.27
CCDC43-201ENST00000315286 TAF4O00268 1085 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 NTN3O00634 580 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-201ENST00000315286 CLEC2LP0C7M8 214 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 ASAH2BP0C7U1 165 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 FGF5P12034 268 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 DUSP3P51452 185 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-201ENST00000315286 NRG3P56975 720 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 TAAR8Q969N4 342 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 ZMYND19Q96E35 227 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-201ENST00000315286 DCLRE1CQ96SD1 692 aaKnown RBP16.71■□□□□ 0.27
CCDC43-201ENST00000315286 GPX7Q96SL4 187 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-201ENST00000315286 FBXO4Q9UKT5 387 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 SIRT4Q9Y6E7 314 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-201ENST00000315286 EXPH5Q8NEV8 1989 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 TRDV1A0A1B0GX56 115 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 ADAM10O14672 748 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 IL1AP01583 271 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 SYPP08247 313 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 PGCP20142 388 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 CD40LGP29965 261 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 FGF9P31371 208 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-201ENST00000315286 SDC2P34741 201 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 ZNF85Q03923 595 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 C11orf91Q3C1V1 193 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 TUBA3EQ6PEY2 450 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 ARIH2OSQ8N7S6 290 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 LRRC75AQ8NAA5 344 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 ZPLD1Q8TCW7 415 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 DUSP19Q8WTR2 217 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 ZNRF4Q8WWF5 429 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 C8orf44Q96CB5 159 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 CRB3Q9BUF7 120 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 HDHD5Q9BXW7 423 aa16.71■□□□□ 0.27
CCDC43-201ENST00000315286 A0A0C4DFX4 3053 aa16.71■□□□□ 0.26
CCDC43-201ENST00000315286 TRBV11-1A0A0K0K1C0 115 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 OR6C68A6NDL8 312 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 TMEM200CA6NKL6 621 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms