RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 PPP1R32Q7Z5V6 425 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 BBS1Q8NFJ9 593 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 OR10G3Q8NGC4 313 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 ST8SIA1Q92185 356 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 HIST1H2ACQ93077 130 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 MOGAT1Q96PD6 335 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 GPX7Q96SL4 187 aaPredicted RBP15.2■□□□□ 0.02
CLCF1-201ENST00000312438 PRRX2Q99811 253 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 DCUN1D5Q9BTE7 237 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 NRIP3Q9NQ35 241 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 FOXJ2Q9P0K8 574 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 ZNF229Q9UJW7 825 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 EXOSC1Q9Y3B2 195 aaKnown RBP15.2■□□□□ 0.02
CLCF1-201ENST00000312438 TMED7Q9Y3B3 224 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 IER3IP1Q9Y5U9 82 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 A0A0C4DFX4 3053 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 MCIDASD6RGH6 385 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 BLOC1S5-TXNDC5H3BN57 136 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 MYL12BO14950 172 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 PAICSP22234 425 aaKnown RBP15.2■□□□□ 0.02
CLCF1-201ENST00000312438 NR4A1P22736 598 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 ATP6V1E1P36543 226 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 TGFBR2P37173 567 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 PEX19P40855 299 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 SOX3P41225 446 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 CASP3P42574 277 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 RGS6P49758 472 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 RPS18P62269 152 aaKnown RBP15.2■□□□□ 0.02
CLCF1-201ENST00000312438 C1DQ13901 141 aaKnown RBP15.2■□□□□ 0.02
CLCF1-201ENST00000312438 ARMC4Q5T2S8 1044 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 POMZP3Q6PJE2 187 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 SLC37A3Q8NCC5 494 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 TAAR8Q969N4 342 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 GPR87Q9BY21 358 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 FKRPQ9H9S5 495 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 MED11Q9P086 117 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 PPP4R1LQ9P1A2 415 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 KLHL21Q9UJP4 597 aa15.2■□□□□ 0.02
CLCF1-201ENST00000312438 LSM2Q9Y333 95 aaKnown RBP15.2■□□□□ 0.02
CLCF1-201ENST00000312438 WDFY4Q6ZS81 3184 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 IGLV3-32A0A0A0MS00 114 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 A8MVM7 634 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 SLC22A1O15245 554 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 SUSD5O60279 629 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 FOXD2O60548 495 aaPredicted RBP15.19■□□□□ 0.02
CLCF1-201ENST00000312438 OTX2P32243 289 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 PTGDSP41222 190 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 RPS5P46782 204 aaKnown RBP15.19■□□□□ 0.02
CLCF1-201ENST00000312438 ETV1P50549 477 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 DLX5P56178 289 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 SNTA1Q13424 505 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 STPG1Q5TH74 334 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 FCRLBQ6BAA4 426 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 NIPAL3Q6P499 406 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 C5orf46Q6UWT4 87 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 RPS19BP1Q86WX3 136 aaKnown RBP15.19■□□□□ 0.02
CLCF1-201ENST00000312438 DND1Q8IYX4 353 aaKnown RBP15.19■□□□□ 0.02
CLCF1-201ENST00000312438 OR52E2Q8NGJ4 325 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 STK35Q8TDR2 534 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 FAM117AQ9C073 453 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 NDEL1Q9GZM8 345 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 CDCP1Q9H5V8 836 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 CPNE5Q9HCH3 593 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 WIF1Q9Y5W5 379 aa15.19■□□□□ 0.02
CLCF1-201ENST00000312438 TMEM72A0PK05 275 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 SLC22A31A6NKX4 558 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 C21orf140B9A014 251 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 NPIPB7O75200 414 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 MT-ATP6P00846 226 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 APEHP13798 732 aaKnown RBP15.18■□□□□ 0.02
CLCF1-201ENST00000312438 PRKCAP17252 672 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 AQP2P41181 271 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 APOBEC1P41238 236 aaKnown RBP15.18■□□□□ 0.02
CLCF1-201ENST00000312438 CRMP1Q14194 572 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 BICRALQ6AI39 1079 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 IGFN1Q86VF2 1251 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 ARMC10Q8N2F6 343 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 PSD4Q8NDX1 1056 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 NLGN4YQ8NFZ3 816 aaPredicted RBP15.18■□□□□ 0.02
CLCF1-201ENST00000312438 MOSPD2Q8NHP6 518 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 SECISBP2Q96T21 854 aaKnown RBP15.18■□□□□ 0.02
CLCF1-201ENST00000312438 TEAD3Q99594 435 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 HCAR1Q9BXC0 346 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 B3GNT4Q9C0J1 378 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 MED20Q9H944 212 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 TNFRSF10DQ9UBN6 386 aa15.18■□□□□ 0.02
CLCF1-201ENST00000312438 TMEM129A0AVI4 362 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 APOL3O95236 402 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 BCL10O95999 233 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 HPP00738 406 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 SCG5P05408 212 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 TSPAN19P0C672 248 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 HIST1H1CP16403 213 aaKnown RBP15.17■□□□□ 0.02
CLCF1-201ENST00000312438 ZNF182P17025 639 aaPredicted RBP15.17■□□□□ 0.02
CLCF1-201ENST00000312438 SSR4P51571 173 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 AQP6Q13520 282 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 KLHL12Q53G59 568 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 ALG10Q5BKT4 473 aa15.17■□□□□ 0.02
CLCF1-201ENST00000312438 TMEM81Q6P7N7 255 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms