RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 OR56A3Q8NH54 315 aa10.1□□□□□ -0.79
GGA2-201ENST00000309859 PPP1R14AQ96A00 147 aa10.1□□□□□ -0.79
GGA2-201ENST00000309859 SHARPINQ9H0F6 387 aa10.1□□□□□ -0.79
GGA2-201ENST00000309859 NEUROD4Q9HD90 331 aa10.1□□□□□ -0.79
GGA2-201ENST00000309859 CENPMQ9NSP4 180 aa10.1□□□□□ -0.79
GGA2-201ENST00000309859 LAMP5Q9UJQ1 280 aa10.1□□□□□ -0.79
GGA2-201ENST00000309859 IGKV6-21A0A0C4DH24 114 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ZNF878C9JN71 531 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 PTGESO14684 152 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 OR10H2O60403 315 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 MRPS6P82932 125 aaKnown RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 ZNF155Q12901 538 aaPredicted RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 TEAD2Q15562 447 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 CCNJQ5T5M9 372 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 MEPCEQ7L2J0 689 aaKnown RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 OVCH2Q7RTZ1 564 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 OR13C2Q8NGS9 318 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 SAMD11Q96NU1 681 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ISYNA1Q9NPH2 558 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 TAF1LQ8IZX4 1826 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 IGKV6D-21A0A0A0MT36 114 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ZNF736B4DX44 427 aaPredicted RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 ETHE1O95571 254 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ADRA2AP08913 450 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 OR8U9P0C7N5 309 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ZNF750Q32MQ0 723 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ACER2Q5QJU3 275 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ARHGAP11AQ6P4F7 1023 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 SIRT6Q8N6T7 355 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 SUMF2Q8NBJ7 301 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 PPP1R3EQ9H7J1 279 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 HMX1Q9NP08 348 aaPredicted RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 NPC1O15118 1278 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 SLC25A12O75746 678 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 SMIM6P0DI80 62 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 POLR2LP62875 67 aaKnown RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 RIN1Q13671 783 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 SGCAQ16586 387 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ZC3H14Q6PJT7 736 aaKnown RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 MUC20Q8N307 709 aaPredicted RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 LINC00471Q8N535 108 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 SENP5Q96HI0 755 aaPredicted RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 CNN2Q99439 309 aaKnown RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 TXNRD2Q9NNW7 524 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 HINT3Q9NQE9 182 aaKnown RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 CSAG2Q9Y5P2 127 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 DLEC1Q9Y238 1755 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 TMEM129A0AVI4 362 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ATF1P18846 271 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 IDH3GP51553 393 aaPredicted RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 HIST2H3PS2Q5TEC6 136 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 OR2A2Q6IF42 318 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 HSD17B13Q7Z5P4 300 aaPredicted RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 ZNF561Q8N587 486 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 LILRA3Q8N6C8 439 aaPredicted RBP10.09□□□□□ -0.79
GGA2-201ENST00000309859 OR5P2Q8WZ92 322 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 TMEM41AQ96HV5 264 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 KLHL15Q96M94 604 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 CLCC1Q96S66 551 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 TRIM2Q9C040 744 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 CHST8Q9H2A9 424 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 GAREM1Q9H706 876 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 IL17CQ9P0M4 197 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 ABRACLQ9P1F3 81 aa10.09□□□□□ -0.79
GGA2-201ENST00000309859 TMEM218A2RU14 115 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 CBY3A6NI87 242 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 DNASE2O00115 360 aaPredicted RBP10.08□□□□□ -0.8
GGA2-201ENST00000309859 OR2C1O95371 312 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 SNRPNP63162 240 aaKnown RBP10.08□□□□□ -0.8
GGA2-201ENST00000309859 TIAL1Q01085 375 aaKnown RBP eCLIP10.08□□□□□ -0.83e-14■■■■■ 40.5
GGA2-201ENST00000309859 ENTPD8Q5MY95 495 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 FAM46CQ5VWP2 391 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 TCTN3Q6NUS6 607 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 TMEM173Q86WV6 379 aaPredicted RBP10.08□□□□□ -0.8
GGA2-201ENST00000309859 ARL14EPQ8N8R7 260 aaPredicted RBP10.08□□□□□ -0.8
GGA2-201ENST00000309859 NECAB3Q96P71 396 aaPredicted RBP10.08□□□□□ -0.8
GGA2-201ENST00000309859 SEMA7AO75326 666 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 SNAPC5O75971 98 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 PRKAR1BP31321 381 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 OR1D2P34982 312 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 CTSOP43234 321 aaPredicted RBP10.08□□□□□ -0.8
GGA2-201ENST00000309859 MRPL19P49406 292 aaKnown RBP10.08□□□□□ -0.8
GGA2-201ENST00000309859 RNF4P78317 190 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 CBFBQ13951 182 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 NKAIN4Q8IVV8 208 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 SLC35F2Q8IXU6 374 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 LILRB2Q8N423 598 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 OR5K2Q8NHB8 316 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 C16orf58Q96GQ5 468 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 TTC3P53804 2025 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 A0A1B0GUH1 482 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 NDUFS4O43181 175 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 TYRP14679 529 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 GLDNQ6ZMI3 551 aaPredicted RBP10.08□□□□□ -0.8
GGA2-201ENST00000309859 Q6ZVU0 165 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 OR51D1Q8NGF3 324 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 OR1S1Q8NH92 325 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 PPP1R1CQ8WVI7 109 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 RHOFQ9HBH0 211 aa10.08□□□□□ -0.8
GGA2-201ENST00000309859 GAR1Q9NY12 217 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms