RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TRBV2A0A0J9YWF9 115 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 SH3D21A4FU49 640 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 CXCL13O43927 109 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ATP1B1P05026 303 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 DRD5P21918 477 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 THBS2P35442 1172 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 AQP2P41181 271 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 EFNA3P52797 238 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 CLDN15P56746 228 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 H1FNTQ75WM6 255 aaPredicted RBP8.51□□□□□ -1.05
PTPRE-202ENST00000306042 SLCO6A1Q86UG4 719 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF227Q86WZ6 799 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 OR13C2Q8NGS9 318 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 OR5J2Q8NH18 312 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF583Q96ND8 569 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 MUS81Q96NY9 551 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 KATNB1Q9BVA0 655 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 DDA1Q9BW61 102 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ACTR6Q9GZN1 396 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 MYOTQ9UBF9 498 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 UBE2QL1A1L167 161 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 KDM4EB2RXH2 506 aaPredicted RBP8.51□□□□□ -1.05
PTPRE-202ENST00000306042 H0YAE9 185 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 CLIC3O95833 236 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 THBS1P07996 1170 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 IL12AP29459 219 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 RAB39AQ14964 217 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 TSTQ16762 297 aaKnown RBP8.51□□□□□ -1.05
PTPRE-202ENST00000306042 LIN54Q6MZP7 749 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 SLC35D2Q76EJ3 337 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 HS3ST5Q8IZT8 346 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 BEST3Q8N1M1 668 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 OR13C3Q8NGS6 347 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 NINJ1Q92982 152 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 WDR34Q96EX3 536 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 NRTNQ99748 197 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ASCC3Q8N3C0 2202 aaKnown RBP8.51□□□□□ -1.05
PTPRE-202ENST00000306042 TVP23AA6NH52 213 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 SLC22A20A6NK97 555 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 HMGN4O00479 90 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 CHP2O43745 196 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 GATBO75879 557 aaKnown RBP8.51□□□□□ -1.05
PTPRE-202ENST00000306042 AKR7A3O95154 331 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 MT-ATP6P00846 226 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 LPLP06858 475 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 HTR5AP47898 357 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ANKDD1AQ495B1 522 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 VASNQ6EMK4 673 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 CGB2Q6NT52 195 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 B3GNT6Q6ZMB0 384 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 OR5M9Q8NGP3 310 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 BORCS8Q96FH0 119 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 ZC3H10Q96K80 434 aaKnown RBP8.51□□□□□ -1.05
PTPRE-202ENST00000306042 OR10A2Q9H208 303 aa8.51□□□□□ -1.05
PTPRE-202ENST00000306042 MOV10Q9HCE1 1003 aaKnown RBP8.51□□□□□ -1.05
PTPRE-202ENST00000306042 LCTP09848 1927 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF814B7Z6K7 855 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 J3KTA2 159 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 IGHV3-9P01782 118 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 SBK3P0C264 359 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 PUDPQ08623 228 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF846Q147U1 533 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 SEC23BQ15437 767 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 TMEM236Q5W0B7 351 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 SSX8Q7RTT4 187 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 MAVSQ7Z434 540 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 MRGPREQ86SM8 312 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ZBTB46Q86UZ6 589 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 OR6T1Q8NGN1 323 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 DHRS1Q96LJ7 313 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 TEX13CA0A0J9YWL9 993 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF878C9JN71 531 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ENTPD6O75354 484 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 DNAJB5O75953 348 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 C4BPBP20851 252 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 GRK5P34947 590 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 CA5AP35218 305 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 PTGS2P35354 604 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 RELAQ04206 551 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 CBX3Q13185 183 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 FUNDC1Q8IVP5 155 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 CNIH3Q8TBE1 160 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 MRGPRX4Q96LA9 322 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 WDR54Q9H977 334 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ARID1BQ8NFD5 2236 aaPredicted RBP8.5□□□□□ -1.05
PTPRE-202ENST00000306042 A0A1B0GTL3 188 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 OR5H15A6NDH6 313 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 SYT7O43581 403 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 SCGB2A1O75556 95 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 NAGAP17050 411 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 PRPH2P23942 346 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ABCD3P28288 659 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 DSCR4P56555 118 aaPredicted RBP8.5□□□□□ -1.05
PTPRE-202ENST00000306042 DCAF10Q5QP82 559 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 PGM2L1Q6PCE3 622 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 M1APQ8TC57 530 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ZBTB8AQ96BR9 441 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 TAMM41Q96BW9 452 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 FOXN4Q96NZ1 517 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 SAP130Q9H0E3 1048 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms