RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TRAPPC5Q8IUR0 188 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 SIX5Q8N196 739 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 KLHL36Q8N4N3 616 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 ACOT4Q8N9L9 421 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR7G2Q8NG99 324 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR4D10Q8NGI6 311 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OTUB1Q96FW1 271 aaPredicted RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 SFXN2Q96NB2 322 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 DERL3Q96Q80 235 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR2A5Q96R48 311 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 EGLN1Q9GZT9 426 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 FN3KRPQ9HA64 309 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 MIEF1Q9NQG6 463 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 PLA2G2EQ9NZK7 142 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 PLAGL1Q9UM63 463 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 PRELID1Q9Y255 219 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 ZNF443Q9Y2A4 671 aaPredicted RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 YBX2Q9Y2T7 364 aaKnown RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 SLC22A7Q9Y694 548 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 TRAV6A0A075B6T7 132 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 CASKO14936 926 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 PEX14O75381 377 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 APBB3O95704 486 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 HMGN1P05114 100 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 POU1F1P28069 291 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 CA8P35219 290 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 MLLT1Q03111 559 aaPredicted RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 FGFBP1Q14512 234 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 SLC9A5Q14940 896 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 KIR2DS3Q14952 304 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OPCMLQ14982 345 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 IRF4Q15306 451 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 ANGPT1Q15389 498 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 ZNF141Q15928 474 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 TCTE1Q5JU00 501 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 C18orf63Q68DL7 685 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR5M10Q6IEU7 315 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 CRIP3Q6Q6R5 217 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 BAIAP2L2Q6UXY1 529 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 ZAR1Q86SH2 424 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 LURAP1LQ8IV03 231 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 SLITRK4Q8IW52 837 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 SYS1Q8N2H4 156 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 LRRC17Q8N6Y2 441 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 BEST4Q8NFU0 473 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 RBM18Q96H35 190 aaKnown RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 YPEL4Q96NS1 127 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 METTL17Q9H7H0 456 aaPredicted RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 SFXN1Q9H9B4 322 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 EXOSC4Q9NPD3 245 aaKnown RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 C14orf105Q9NVL8 296 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 COQ3Q9NZJ6 369 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 COPZ2Q9P299 210 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR5V1Q9UGF6 321 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 TEKT2Q9UIF3 430 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 PRUNE2Q8WUY3 3088 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 ANXA2P2A6NMY6 339 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 K7EQS6 105 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 CYR61O00622 381 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 SIGLEC5O15389 551 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 NKX2-2O95096 273 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 ITGB2P05107 769 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 IFNGR1P15260 489 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 HLA-GP17693 338 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 GPR4P46093 362 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 P2RX1P51575 399 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 CLDN2P57739 230 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 RPS7P62081 194 aaKnown RBP4.98□□□□□ -1.61
VPS50-202ENST00000305866 RPS21P63220 83 aaKnown RBP4.98□□□□□ -1.61
VPS50-202ENST00000305866 NTHL1P78549 312 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 PRR5P85299 388 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 SIGLEC14Q08ET2 396 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 C1DQ13901 141 aaKnown RBP4.98□□□□□ -1.61
VPS50-202ENST00000305866 SNAPC1Q16533 368 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 EIPR1Q53HC9 387 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 FNDC7Q5VTL7 733 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 JMJD6Q6NYC1 403 aaPredicted RBP4.98□□□□□ -1.61
VPS50-202ENST00000305866 PSRC1Q6PGN9 363 aaPredicted RBP4.98□□□□□ -1.61
VPS50-202ENST00000305866 VITQ6UXI7 678 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 HDDC2Q7Z4H3 204 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 NPEPL1Q8NDH3 523 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 OR6K3Q8NGY3 331 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 POF1BQ8WVV4 589 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 SAMD8Q96LT4 415 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 ABRACLQ9P1F3 81 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 UBQLN2Q9UHD9 624 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 TAC3Q9UHF0 121 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 KLHDC2Q9Y2U9 406 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 TNRC6BQ9UPQ9 1833 aaKnown RBP4.98□□□□□ -1.61
VPS50-202ENST00000305866 DBX1A6NMT0 343 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 SNRPGP15A8MWD9 76 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 LGALS8O00214 317 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 SLC28A2O43868 658 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 WISP1O95388 367 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 TXNDC12O95881 172 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 EPCAMP16422 314 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 PPP2R1BP30154 601 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 LCN1P31025 176 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 CSF2RBP32927 897 aa4.98□□□□□ -1.61
VPS50-202ENST00000305866 GDNFP39905 211 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms