RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 MN1Q10571 1320 aaPredicted RBP11.96□□□□□ -0.49
COL3A1-201ENST00000304636 RAB19A4D1S5 217 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 C17orf105B2RV13 164 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 GPR75O95800 540 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 OR8G3PP0DMU2 310 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 ZMAT1Q5H9K5 638 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 PRAMEF8Q5VWM4 474 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 PRAMEF7Q5VXH5 474 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 TMUB2Q71RG4 321 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF765Q7L2R6 523 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 ADGRF3Q8IZF5 1079 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 SLC43A2Q8N370 569 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 TM4SF18Q96CE8 201 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 NICN1Q9BSH3 213 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 APOOQ9BUR5 198 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 SLC25A31Q9H0C2 315 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 QRSL1Q9H0R6 528 aaKnown RBP11.96□□□□□ -0.5
COL3A1-201ENST00000304636 RLIMQ9NVW2 624 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 CBLCQ9ULV8 474 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 A0A1B0GUL6 1792 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 TMEM269A0A1B0GVZ9 245 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 B4DXG7 233 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 FXYD1O00168 92 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 DUX1O43812 170 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 KLK8O60259 260 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 PMS2P2O95744 297 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 GJA5P36382 358 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 TAS2R46P59540 309 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 RAET1LQ5VY80 246 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 PRICKLE2Q7Z3G6 844 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 GPR137CQ8N3F9 429 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 OR6T1Q8NGN1 323 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 TERB2Q8NHR7 220 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 CASD1Q96PB1 797 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 MS4A8Q9BY19 250 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF160Q9HCG1 818 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 SDHAF2Q9NX18 166 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 GMEB2Q9UKD1 530 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 NME7Q9Y5B8 376 aa11.96□□□□□ -0.5
COL3A1-201ENST00000304636 SGK494L7N484 410 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 PAPLNO95428 1278 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 M6PRP20645 277 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 NTSR1P30989 418 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 ETV5P41161 510 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 TGM4P49221 684 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 EMP2P54851 167 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 SQSTM1Q13501 440 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 BCL2A1Q16548 175 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 HYAL4Q2M3T9 481 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 SAXO2Q658L1 398 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 MFSD9Q8NBP5 474 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 OR5T1Q8NG75 326 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 TIMM29Q9BSF4 260 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 SLCO5A1Q9H2Y9 848 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 SFXN1Q9H9B4 322 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 TNFRSF12AQ9NP84 129 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 NOX4Q9NPH5 578 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 RPS10-NUDT3A0A1W2PQS6 291 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 BLACEA4D250 179 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 ZAR1LA6NP61 321 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 TOR1AO14656 332 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 RPS2P15880 293 aaKnown RBP11.95□□□□□ -0.5
COL3A1-201ENST00000304636 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
COL3A1-201ENST00000304636 KIAA1024LP59773 190 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 PLA2G7Q13093 441 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 DEFB110Q30KQ9 67 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 EEF1A1P5Q5VTE0 462 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 NDUFAF7Q7L592 441 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 FAM122BQ7Z309 247 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 GDF7Q7Z4P5 450 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 GIMAP5Q96F15 307 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 TNFRSF13CQ96RJ3 184 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 ALG12Q9BV10 488 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 AKAP11Q9UKA4 1901 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 A0A0B4J2A0 478 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 TARM1B6A8C7 271 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 SLCO2B1O94956 709 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 GIPP09681 153 aaPredicted RBP11.95□□□□□ -0.5
COL3A1-201ENST00000304636 ELK1P19419 428 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 HTR2CP28335 458 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 NUDT1P36639 197 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 VIPR2P41587 438 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 SNU13P55769 128 aaKnown RBP11.95□□□□□ -0.5
COL3A1-201ENST00000304636 STEAP1BQ6NZ63 245 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 NIPAL3Q6P499 406 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 DNAAF1Q8NEP3 725 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 OR1S1Q8NH92 325 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 NUDT8Q8WV74 236 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 ISYNA1Q9NPH2 558 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 FAM212BQ9NTI7 297 aaPredicted RBP11.95□□□□□ -0.5
COL3A1-201ENST00000304636 SHPKQ9UHJ6 478 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 TRIM64A6NGJ6 449 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 K7EPK0 472 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
COL3A1-201ENST00000304636 HOXB5P09067 269 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 TGFBR1P36897 503 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 CX3CR1P49238 355 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 SRP9P49458 86 aaKnown RBP11.95□□□□□ -0.5
COL3A1-201ENST00000304636 GAB1Q13480 694 aa11.95□□□□□ -0.5
COL3A1-201ENST00000304636 CTF1Q16619 201 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms