RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 TMEM203Q969S6 136 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 SGTBQ96EQ0 304 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 WDR54Q9H977 334 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 TMEM9BQ9NQ34 198 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 H2AFY2Q9P0M6 372 aaPredicted RBP19.46■□□□□ 0.71
SOX17-201ENST00000297316 C2orf72A6NCS6 295 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 B4E171 279 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 TSPAN7P41732 249 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 ZNF517Q6ZMY9 492 aaPredicted RBP19.46■□□□□ 0.71
SOX17-201ENST00000297316 LINC00299Q6ZSB3 139 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 MEPCEQ7L2J0 689 aaKnown RBP19.46■□□□□ 0.71
SOX17-201ENST00000297316 RAB11FIP2Q7L804 512 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 SECISBP2Q96T21 854 aaKnown RBP19.46■□□□□ 0.71
SOX17-201ENST00000297316 MROQ9BYG7 248 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 TBL1XR1Q9BZK7 514 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 NXF2Q9GZY0 626 aaKnown RBP19.46■□□□□ 0.71
SOX17-201ENST00000297316 CCDC59Q9P031 241 aaKnown RBP19.46■□□□□ 0.71
SOX17-201ENST00000297316 SEC14L4Q9UDX3 406 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 PISDQ9UG56 409 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 STUB1Q9UNE7 303 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 A0A1W2PNU3 283 aaPredicted RBP19.45■□□□□ 0.7
SOX17-201ENST00000297316 CCDC182A6NF36 153 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 NDUFB5O43674 189 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 EVI2BP34910 448 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 INAQ16352 499 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 KLHL12Q53G59 568 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 ZNF440Q8IYI8 595 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 S100ZQ8WXG8 99 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 LRFN5Q96NI6 719 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 ARHGAP9Q9BRR9 750 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 ERVK13-1Q9NX77 482 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 ALG1L2C9J202 215 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 MCIDASD6RGH6 385 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 MASP2O00187 686 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 FADS1O60427 444 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 STK17BO94768 372 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 RPS25P62851 125 aaKnown RBP19.45■□□□□ 0.7
SOX17-201ENST00000297316 ISXQ2M1V0 245 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 DCAF12Q5T6F0 453 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 RTL4Q6ZR62 310 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 ATG4DQ86TL0 474 aaPredicted RBP19.45■□□□□ 0.7
SOX17-201ENST00000297316 GID4Q8IVV7 300 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 TMEM99Q8N816 258 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 TP53INP1Q96A56 240 aa19.45■□□□□ 0.7
SOX17-201ENST00000297316 C6orf62Q9GZU0 229 aaPredicted RBP19.45■□□□□ 0.7
SOX17-201ENST00000297316 SF3B6Q9Y3B4 125 aaKnown RBP19.45■□□□□ 0.7
SOX17-201ENST00000297316 SDK2Q58EX2 2172 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 ADAM10O14672 748 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 PSMA1P25786 263 aaKnown RBP19.44■□□□□ 0.7
SOX17-201ENST00000297316 ATP6V1E1P36543 226 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 NRG3P56975 720 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 IFITM3Q01628 133 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 PCOLCEQ15113 449 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 WBP2NLQ6ICG8 309 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 OR5M10Q6IEU7 315 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 ASPNQ9BXN1 380 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 OR51V1Q9H2C8 321 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 MMP27Q9H306 513 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 RERGLQ9H628 205 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 EXOSC3Q9NQT5 275 aaKnown RBP19.44■□□□□ 0.7
SOX17-201ENST00000297316 TOR4AQ9NXH8 423 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 TNFRSF10DQ9UBN6 386 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 C19orf25Q9UFG5 118 aaPredicted RBP19.44■□□□□ 0.7
SOX17-201ENST00000297316 EML6Q6ZMW3 1958 aa19.44■□□□□ 0.7
SOX17-201ENST00000297316 C9J4A7 227 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 PRR23D1E9PI22 279 aaPredicted RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 GYPBP06028 91 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 TSPAN19P0C672 248 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 PRR23D2P0DMB1 279 aaPredicted RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 SLC2A5P22732 501 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 ITPKBP27987 946 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 SLC6A6P31641 620 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 TIPARPQ7Z3E1 657 aaKnown RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 ZNF563Q8TA94 476 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 NUBPLQ8TB37 319 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 TBX5Q99593 518 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 TIMP4Q99727 224 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 LAT2Q9GZY6 243 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 PARD6AQ9NPB6 346 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 AKAP7Q9P0M2 348 aaPredicted RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 CHRNA9Q9UGM1 479 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 ADAM18Q9Y3Q7 739 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 OR6C70A6NIJ9 312 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 PLD2O14939 933 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 PPM1BO75688 479 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 PEPDP12955 493 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 RPS19P39019 145 aaKnown RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 RPS18P62269 152 aaKnown RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 TPBGQ13641 420 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 BICRALQ6AI39 1079 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 DHRS13Q6UX07 377 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 SMAP2Q8WU79 429 aaPredicted RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 SPRYD4Q8WW59 207 aaPredicted RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 DNAJA3Q96EY1 480 aa19.43■□□□□ 0.7
SOX17-201ENST00000297316 ERMAPQ96PL5 475 aaPredicted RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 NXT1Q9UKK6 140 aaKnown RBP19.43■□□□□ 0.7
SOX17-201ENST00000297316 B4DXG7 233 aa19.42■□□□□ 0.7
SOX17-201ENST00000297316 BTBD16Q32M84 506 aa19.42■□□□□ 0.7
SOX17-201ENST00000297316 POMZP3Q6PJE2 187 aa19.42■□□□□ 0.7
SOX17-201ENST00000297316 SDR9C7Q8NEX9 313 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms