RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 FUZQ9BT04 418 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 GABARAPL1Q9H0R8 117 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 LDAHQ9H6V9 325 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 MRPS18CQ9Y3D5 142 aaKnown RBP13.67□□□□□ -0.22
CCDC140-201ENST00000295226 A0A1W2PRQ8 180 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 H0YC42 278 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 E2F6O75461 281 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 GSTT1P30711 240 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 TTKP33981 857 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 SFTPDP35247 375 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 APOBEC1P41238 236 aaKnown RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 EIF1P41567 113 aaKnown RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 LIMS1P48059 325 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 ALDH3B2P48448 385 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 TPD52P55327 224 aaPredicted RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 EGR4Q05215 589 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 C19orf57Q0VDD7 668 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 KLRB1Q12918 225 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 IL18R1Q13478 541 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 DGCR6Q14129 220 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 DCST1Q5T197 706 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 SHQ1Q6PI26 577 aaKnown RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 TRILQ7L0X0 811 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 PIGQQ9BRB3 760 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 GRIP2Q9C0E4 1043 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 POLR2J2Q9GZM3 115 aaKnown RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 POLR2J3Q9H1A7 115 aaKnown RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 EXO5Q9H790 373 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 CHRNA9Q9UGM1 479 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 IGSF10Q6WRI0 2623 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 SNAP29O95721 258 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 TFPIP10646 304 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 PNMTP11086 282 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 SFTPCP11686 197 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 HTR3AP46098 478 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 HMGA2P52926 109 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 GFRA1P56159 465 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 DLX5P56178 289 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 TMEM176BQ3YBM2 270 aaPredicted RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 GLYR1Q49A26 553 aaPredicted RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 ZNF730Q6ZMV8 503 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 PRICKLE2Q7Z3G6 844 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 OR9Q2Q8NGE9 314 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 TMEM239Q8WW34 195 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 SNRNP40Q96DI7 357 aaKnown RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 KTI12Q96EK9 354 aaPredicted RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 ARL5BQ96KC2 179 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 ACKR4Q9NPB9 350 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 MEPEQ9NQ76 525 aaPredicted RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 PAPOLBQ9NRJ5 636 aaKnown RBP13.66□□□□□ -0.22
CCDC140-201ENST00000295226 C20orf141Q9NUB4 165 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 QPCTLQ9NXS2 382 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 PTTG2Q9NZH5 202 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 SPRR3Q9UBC9 169 aa13.66□□□□□ -0.22
CCDC140-201ENST00000295226 TRGV5A0A0B4J1U4 118 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 A0A1W2PNR3 127 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 SH3PXD2BA1X283 911 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 LRRN3E7EW58 273 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 GNAO1P09471 354 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 BMP7P18075 431 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 CBLP22681 906 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 ADH6P28332 368 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 DNAJA1P31689 397 aaKnown RBP13.65□□□□□ -0.22
CCDC140-201ENST00000295226 CLDN20P56880 219 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 SMIM11AP58511 58 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 NFATC3Q12968 1075 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 C3AR1Q16581 482 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 FAM180AQ6UWF9 173 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 NRMQ8IXM6 262 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 UBQLNLQ8IYU4 475 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 ACOT11Q8WXI4 607 aaPredicted RBP13.65□□□□□ -0.22
CCDC140-201ENST00000295226 NR4A3Q92570 626 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 EPYCQ99645 322 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 ASF1BQ9NVP2 202 aa13.65□□□□□ -0.22
CCDC140-201ENST00000295226 PDP1Q9P0J1 537 aaPredicted RBP13.65□□□□□ -0.22
CCDC140-201ENST00000295226 SEC14L5O43304 696 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 ZNF17P17021 662 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 CDH2P19022 906 aaPredicted RBP13.64□□□□□ -0.23
CCDC140-201ENST00000295226 FUT1P19526 365 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 RPS5P46782 204 aaKnown RBP13.64□□□□□ -0.23
CCDC140-201ENST00000295226 SUCLG1P53597 346 aaKnown RBP13.64□□□□□ -0.23
CCDC140-201ENST00000295226 SRYQ05066 204 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 TOP3AQ13472 1001 aaPredicted RBP13.64□□□□□ -0.23
CCDC140-201ENST00000295226 INAQ16352 499 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 RBM48Q5RL73 367 aaKnown RBP13.64□□□□□ -0.23
CCDC140-201ENST00000295226 THAP5Q7Z6K1 395 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 C8orf59Q8N0T1 100 aaPredicted RBP13.64□□□□□ -0.23
CCDC140-201ENST00000295226 OR4K5Q8NGD3 323 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 NEIL3Q8TAT5 605 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 MPP4Q96JB8 637 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 ZNF426Q9BUY5 554 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 RBM38Q9H0Z9 239 aaKnown RBP13.64□□□□□ -0.23
CCDC140-201ENST00000295226 SERINC1Q9NRX5 453 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 BLOC1S6Q9UL45 172 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 TMCC3Q9ULS5 477 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 ZFYVE26Q68DK2 2539 aa13.64□□□□□ -0.23
CCDC140-201ENST00000295226 TTLL8A6PVC2 850 aa13.63□□□□□ -0.23
CCDC140-201ENST00000295226 ZNF701M0R085 212 aaPredicted RBP13.63□□□□□ -0.23
CCDC140-201ENST00000295226 KALRNO60229 2985 aa13.63□□□□□ -0.23
CCDC140-201ENST00000295226 OR10H3O60404 316 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms