RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TMEM207Q6UWW9 146 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF100Q8IYN0 542 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 CCDC71LQ8N9Z2 235 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 OR6F1Q8NGZ6 308 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 TANKQ92844 425 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 NARFLQ9H6Q4 476 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 ACSS1Q9NUB1 689 aaPredicted RBP15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 H0YIV9 168 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 GFRA2O00451 464 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 FBXO24O75426 580 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 CHATP28329 748 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 AFF3P51826 1226 aaKnown RBP15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 TAS2R19P59542 299 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 SERTAD2Q14140 314 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 GGTA1PQ4G0N0 100 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 KDM4DQ6B0I6 523 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 ABHD12BQ7Z5M8 362 aaPredicted RBP15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 RCBTB1Q8NDN9 531 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 OR4D6Q8NGJ1 314 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 SLC46A2Q9BY10 475 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 TESQ9UGI8 421 aaKnown RBP15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 OPN1LWP04000 364 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 JMJD7P0C870 316 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 ARNTP27540 789 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 HLA-FP30511 346 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 P2RY2P41231 377 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 OR7A5Q15622 319 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 CTF1Q16619 201 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 H3F3CQ6NXT2 135 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 OR56B2PQ8NGI1 322 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF566Q969W8 418 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 YIPF6Q96EC8 236 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 SHDQ96IW2 340 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF578Q96N58 590 aaPredicted RBP15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 ELOVL3Q9HB03 270 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 C12orf10Q9HB07 376 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 C1GALT1Q9NS00 363 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 CCDC88AQ3V6T2 1871 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 MAP1BP46821 2468 aaKnown RBP15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 NUDT21O43809 227 aaKnown RBP15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 TRA2BP62995 288 aaKnown RBP15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 ILKQ13418 452 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 PRR18Q8N4B5 295 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 IL17RCQ8NAC3 791 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 SLAMF9Q96A28 289 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 TPSD1Q9BZJ3 242 aa15.34■□□□□ 0.05
SH3RF1-201ENST00000284637 RAB40ALP0C0E4 278 aa15.33■□□□□ 0.05
SH3RF1-201ENST00000284637 RNF212Q495C1 297 aa15.33■□□□□ 0.05
SH3RF1-201ENST00000284637 LDLRAD1Q5T700 205 aa15.33■□□□□ 0.05
SH3RF1-201ENST00000284637 RPL22L1Q6P5R6 122 aaKnown RBP15.33■□□□□ 0.05
SH3RF1-201ENST00000284637 RAB40AQ8WXH6 277 aa15.33■□□□□ 0.05
SH3RF1-201ENST00000284637 OR5B2Q96R09 309 aa15.33■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF768Q9H5H4 540 aaKnown RBP15.33■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF281Q9Y2X9 895 aa15.33■□□□□ 0.05
SH3RF1-201ENST00000284637 SEMA4FO95754 770 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 AIFM1O95831 613 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 GABRR1P24046 479 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 HTRA4P83105 476 aaPredicted RBP15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 GPR18Q14330 331 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 NFATC4Q14934 902 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 TMEM184AQ6ZMB5 413 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 HTR3DQ70Z44 454 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC35F3Q8IY50 421 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 LGALS14Q8TCE9 139 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 SEC22AQ96IW7 307 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 DDOQ99489 341 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 TCEAL2Q9H3H9 227 aaPredicted RBP15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 CXorf36Q9H7Y0 433 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC35A3Q9Y2D2 325 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 ZNF337Q9Y3M9 751 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 KDM4EB2RXH2 506 aaPredicted RBP15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 ZNF195O14628 629 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 ZNF136P52737 540 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 RBMS2Q15434 407 aaKnown RBP15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 TMEM244Q5VVB8 128 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 SAXO2Q658L1 398 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 SFXN4Q6P4A7 337 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 SHISA6Q6ZSJ9 500 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 COX15Q7KZN9 410 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 OR5D14Q8NGL3 314 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 OR6M1Q8NGM8 313 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 NANPQ8TBE9 248 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 RNF167Q9H6Y7 350 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 CREBZFQ9NS37 354 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 RNF186Q9NXI6 227 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 NDRG3Q9UGV2 375 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 TRAV20A0A0B4J274 112 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 TMEM269A0A1B0GVZ9 245 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 OR2T1O43869 369 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 RBM39Q14498 530 aaKnown RBP15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC9A3R2Q15599 337 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 UBE2NLQ5JXB2 153 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 OLIG3Q7RTU3 272 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 SUMF2Q8NBJ7 301 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 HCAR1Q9BXC0 346 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 ZNF223Q9UK11 482 aaPredicted RBP15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 NME7Q9Y5B8 376 aa15.33■□□□□ 0.04
SH3RF1-201ENST00000284637 NAV1Q8NEY1 1877 aa15.32■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC9B1P1A6NJY1 282 aa15.32■□□□□ 0.04
SH3RF1-201ENST00000284637 VSTM5A8MXK1 200 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms