RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 SLC37A3Q8NCC5 494 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 OR5M3Q8NGP4 307 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 CT55Q8WUE5 264 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 GATAD2BQ8WXI9 593 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 C8orf44Q96CB5 159 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 WDR77Q9BQA1 342 aaPredicted RBP19.1■□□□□ 0.65
YBX3-202ENST00000279550 CHCHD3Q9NX63 227 aaKnown RBP19.1■□□□□ 0.65
YBX3-202ENST00000279550 DLL3Q9NYJ7 618 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 ELOA3DA6NLF2 546 aaPredicted RBP19.09■□□□□ 0.65
YBX3-202ENST00000279550 J3QRE1 110 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 FOLR3P41439 243 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 CRMP1Q14194 572 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 ELOA3BQ3SY89 546 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 RTL4Q6ZR62 310 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 MFSD4AQ8N468 514 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 TMEM99Q8N816 258 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 CYB561A3Q8NBI2 242 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 NLGN4YQ8NFZ3 816 aaPredicted RBP19.09■□□□□ 0.65
YBX3-202ENST00000279550 ELOA3Q8NG57 546 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 OR51G2Q8NGK0 314 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 HSPBAP1Q96EW2 488 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 DACH2Q96NX9 599 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 LPAR4Q99677 370 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 SPIN1Q9Y657 262 aaPredicted RBP19.09■□□□□ 0.65
YBX3-202ENST00000279550 SDK2Q58EX2 2172 aa19.09■□□□□ 0.65
YBX3-202ENST00000279550 RIIAD1A6NNX1 92 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 MCIDASD6RGH6 385 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 PRR23D1E9PI22 279 aaPredicted RBP19.08■□□□□ 0.65
YBX3-202ENST00000279550 LRRTM2O43300 516 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 PRR23D2P0DMB1 279 aaPredicted RBP19.08■□□□□ 0.65
YBX3-202ENST00000279550 CPEP16870 476 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 RNF4P78317 190 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 ZNF791Q3KP31 576 aaPredicted RBP19.08■□□□□ 0.65
YBX3-202ENST00000279550 TIMM50Q3ZCQ8 353 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 TMPRSS7Q7RTY8 843 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 BTLAQ7Z6A9 289 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 APCDD1LQ8NCL9 501 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 MCFD2Q8NI22 146 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 SEMA4CQ9C0C4 833 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 SEC14L4Q9UDX3 406 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 FBXL4Q9UKA2 621 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 TCFL5Q9UL49 500 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 PPIEQ9UNP9 301 aaKnown RBP19.08■□□□□ 0.65
YBX3-202ENST00000279550 BAIAP2Q9UQB8 552 aa19.08■□□□□ 0.65
YBX3-202ENST00000279550 LOC102723996A0A087X1L8 192 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 STMND1H3BQB6 276 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 ADAM10O14672 748 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 PPM1BO75688 479 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 NDUFB2O95178 105 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 WISP1O95388 367 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 LALBAP00709 142 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 CLUP10909 449 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 BMP4P12644 408 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 PEPDP12955 493 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 SLC2A5P22732 501 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 TOMM34Q15785 309 aaPredicted RBP19.08■□□□□ 0.64
YBX3-202ENST00000279550 ERMAPQ96PL5 475 aaPredicted RBP19.08■□□□□ 0.64
YBX3-202ENST00000279550 CDADC1Q9BWV3 514 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 EXOSC4Q9NPD3 245 aaKnown RBP19.08■□□□□ 0.64
YBX3-202ENST00000279550 ERVK13-1Q9NX77 482 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 CCDC59Q9P031 241 aaKnown RBP19.08■□□□□ 0.64
YBX3-202ENST00000279550 TNFRSF10DQ9UBN6 386 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 CHRNA9Q9UGM1 479 aa19.08■□□□□ 0.64
YBX3-202ENST00000279550 YARS2Q9Y2Z4 477 aaKnown RBP19.08■□□□□ 0.64
YBX3-202ENST00000279550 PNMA8CA0A1B0GUJ8 204 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 A0A1W2PQD3 144 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 ALG1L2C9J202 215 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 HCRTR2O43614 444 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 FADS1O60427 444 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 ZNF354AO60765 605 aaPredicted RBP19.07■□□□□ 0.64
YBX3-202ENST00000279550 PNMTP11086 282 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 HK1P19367 917 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 PNLIPRP2P54317 469 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.07■□□□□ 0.64
YBX3-202ENST00000279550 KLHL12Q53G59 568 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 CROCCP3Q8IVE0 287 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 ZFP41Q8N8Y5 198 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 C17orf47Q8NEP4 570 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 CCNL2Q96S94 520 aaPredicted RBP19.07■□□□□ 0.64
YBX3-202ENST00000279550 SECISBP2Q96T21 854 aaKnown RBP19.07■□□□□ 0.64
YBX3-202ENST00000279550 TMEM43Q9BTV4 400 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 JAM3Q9BX67 310 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 SLC19A3Q9BZV2 496 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 OR51V1Q9H2C8 321 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 STUB1Q9UNE7 303 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 FARSAQ9Y285 508 aaKnown RBP19.07■□□□□ 0.64
YBX3-202ENST00000279550 IER3IP1Q9Y5U9 82 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 HS3ST3B1Q9Y662 390 aa19.07■□□□□ 0.64
YBX3-202ENST00000279550 CDRT15L2A8MXV6 281 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 CLDN25C9JDP6 229 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 SCO2O43819 266 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 TACR3P29371 465 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 RPS18P62269 152 aaKnown RBP19.06■□□□□ 0.64
YBX3-202ENST00000279550 RPS25P62851 125 aaKnown RBP19.06■□□□□ 0.64
YBX3-202ENST00000279550 EGR4Q05215 589 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 ARHGAP11AQ6P4F7 1023 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 SLC43A2Q8N370 569 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 MOSPD2Q8NHP6 518 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 ARHGAP9Q9BRR9 750 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 NXF2Q9GZY0 626 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms