RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 LAT2Q9GZY6 243 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 IL20Q9NYY1 176 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 KLF13Q9Y2Y9 288 aaPredicted RBP22.31■■□□□ 1.16
SSBP4-201ENST00000270061 MED31Q9Y3C7 131 aa22.31■■□□□ 1.16
SSBP4-201ENST00000270061 SH3D21A4FU49 640 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 PTGES3LE9PB15 166 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 NDUFAF6Q330K2 333 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 ALG10BQ5I7T1 473 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 CASP12Q6UXS9 341 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 PTCHD4Q6ZW05 846 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 KCTD8Q6ZWB6 473 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 TMPRSS11FQ6ZWK6 438 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 NODALQ96S42 347 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 RASL10BQ96S79 203 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 HPF1Q9NWY4 346 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 RPS6KB2Q9UBS0 482 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 PCDHGB1Q9Y5G3 927 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 NPFFR2Q9Y5X5 522 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 GTPBP1O00178 669 aaKnown RBP22.3■■□□□ 1.16
SSBP4-201ENST00000270061 FAM20BO75063 409 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 NAGAP17050 411 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 SMSP52788 366 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 COPZ1P61923 177 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 EFR3AQ14156 821 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 GINS1Q14691 196 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 GPALPP1Q8IXQ4 340 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 TEX47Q8TBZ9 253 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 SGCDQ92629 289 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 OSTF1Q92882 214 aa22.3■■□□□ 1.16
SSBP4-201ENST00000270061 PCNX1Q96RV3 2341 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 PPM1BO75688 479 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 GPR4P46093 362 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 MDGA2Q7Z553 956 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 MEX3DQ86XN8 651 aaKnown RBP22.29■■□□□ 1.16
SSBP4-201ENST00000270061 CDK20Q8IZL9 346 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 ZNF540Q8NDQ6 660 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 OR8J1Q8NGP2 316 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 TUBA1CQ9BQE3 449 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 RBM38Q9H0Z9 239 aaKnown RBP22.29■■□□□ 1.16
SSBP4-201ENST00000270061 DSN1Q9H410 356 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 EGLN3Q9H6Z9 239 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 VCX3AQ9NNX9 186 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 SELENONQ9NZV5 590 aa22.29■■□□□ 1.16
SSBP4-201ENST00000270061 KLRC4-KLRK1H3BQV0 150 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 FADS1O60427 444 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 EIF4E2O60573 245 aaKnown RBP22.28■■□□□ 1.16
SSBP4-201ENST00000270061 RNF224P0DH78 156 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 SOX3P41225 446 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 SLC6A8P48029 635 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 C4orf17Q53FE4 359 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 TMEM201Q5SNT2 666 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 SLC25A30Q5SVS4 291 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 DESI1Q6ICB0 168 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 SLC27A4Q6P1M0 643 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 IL20RBQ6UXL0 311 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 ZNF620Q6ZNG0 422 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 CADM2Q8N3J6 435 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 RNF217Q8TC41 542 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 DGCR14Q96DF8 476 aaKnown RBP22.28■■□□□ 1.16
SSBP4-201ENST00000270061 ARSGQ96EG1 525 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 POLDIP3Q9BY77 421 aaKnown RBP22.28■■□□□ 1.16
SSBP4-201ENST00000270061 PLA2G12AQ9BZM1 189 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 TIMMDC1Q9NPL8 285 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 FKBP14Q9NWM8 211 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 PSORS1C1Q9UIG5 152 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 SNX5Q9Y5X3 404 aa22.28■■□□□ 1.16
SSBP4-201ENST00000270061 LRRTM2O43300 516 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 STSP08842 583 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 IFI30P13284 250 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 TTKP33981 857 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 EFNB1P98172 346 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 ZBED5Q49AG3 693 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 WBP2NLQ6ICG8 309 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 ACSM5Q6NUN0 579 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 GATSQ8NAP1 163 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 PFN4Q8NHR9 129 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 SIGLEC11Q96RL6 698 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 TSPAN10Q9H1Z9 355 aaPredicted RBP22.27■■□□□ 1.16
SSBP4-201ENST00000270061 MEPEQ9NQ76 525 aaPredicted RBP22.27■■□□□ 1.16
SSBP4-201ENST00000270061 CLN6Q9NWW5 311 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 CARD8Q9Y2G2 431 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 CDH10Q9Y6N8 788 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 DNAJC13O75165 2243 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 A0A087WUJ7 227 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 NBPF19A0A087WUL8 3843 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 CDC42EP2O14613 210 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 OIP5O43482 229 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 NADKO95544 446 aaPredicted RBP22.27■■□□□ 1.16
SSBP4-201ENST00000270061 ZNF24P17028 368 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 RBPJQ06330 500 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 KRTCAP3Q53RY4 240 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 XAF1Q6GPH4 301 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 SULF2Q8IWU5 870 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 PSD4Q8NDX1 1056 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 OR8D4Q8NGM9 314 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 TMIGD2Q96BF3 282 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 BPIFA2Q96DR5 249 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 Q96MT0 163 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 C20orf141Q9NUB4 165 aa22.27■■□□□ 1.16
SSBP4-201ENST00000270061 UNC119BA6NIH7 251 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms