RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 PDLIM3Q53GG5 364 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 FAM122CQ6P4D5 195 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SLC25A46Q96AG3 418 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TSSK2Q96PF2 358 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SAP130Q9H0E3 1048 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 RARRES3Q9UL19 164 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ATXN7L1Q9ULK2 861 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 GABRR3A8MPY1 467 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 OR2T1O43869 369 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 T-ENOLP0DO92 83 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 IVDP26440 423 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 RPS15P62841 145 aaKnown RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 KCNJ8Q15842 424 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 PAGE3Q5JUK9 113 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 FIGLAQ6QHK4 219 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 RETREG3Q86VR2 466 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 BBS1Q8NFJ9 593 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TMEM174Q8WUU8 243 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SLC29A1Q99808 456 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 RBM24Q9BX46 236 aaKnown RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 MCTS1Q9ULC4 181 aaKnown RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ENTPD2Q9Y5L3 495 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF407Q9C0G0 2248 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 CCDC163A0A0D9SF12 145 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 NCR1O76036 304 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SNRNP70P08621 437 aaKnown RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 OR2T7P0C7T2 308 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 CPMP14384 443 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 AOAHP28039 575 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 DCAF7P61962 342 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ESCO2Q56NI9 601 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 EXOSC6Q5RKV6 272 aaKnown RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ATPAF1Q5TC12 328 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 VASNQ6EMK4 673 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 LINC00299Q6ZSB3 139 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 NDUFAF7Q7L592 441 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 OR2T27Q8NH04 317 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 OR4Q3Q8NH05 313 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 OR14L1PQ8NHC6 308 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 UBTD2Q8WUN7 234 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 FOXJ1Q92949 421 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TMIGD2Q96BF3 282 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SCLYQ96I15 445 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 HIPK2Q9H2X6 1198 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 NIPAL2Q9H841 368 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 PCNX1Q96RV3 2341 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TRBV4-1A0A0J9YWV2 114 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ZCWPW2A0A1B0GU75 182 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 KDM4FA0A1W2PPD8 638 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 A0A1W2PQU0 124 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TMEM200CA6NKL6 621 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 GLSO94925 669 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SDC1P18827 310 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SSTR2P30874 369 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TNFSF8P32971 234 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TGFBR3Q03167 851 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 PIN1Q13526 163 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 GPR18Q14330 331 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF266Q14584 549 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 CTSL3PQ5NE16 218 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 C1orf220Q5T0J3 134 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 HENMT1Q5T8I9 393 aaKnown RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 FAM199XQ6PEV8 388 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF551Q7Z340 670 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 LAX1Q8IWV1 398 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 KDM8Q8N371 416 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 RNF141Q8WVD5 230 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 CDS1Q92903 461 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 PSD2Q9BQI7 771 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SLC6A20Q9NP91 592 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 BABAM2Q9NXR7 383 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 RBPJLQ9UBG7 517 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 CA5BQ9Y2D0 317 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 POLEQ07864 2286 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 A0A1W2PPV4 95 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 DCDC2BA2VCK2 349 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 PRAMEF27A3QJZ7 478 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TRAPPC2LH3BP13 241 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SULT1B1O43704 296 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ADAMTS4O75173 837 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 BMP4P12644 408 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 HLA-DOBP13765 273 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 NAGAP17050 411 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 FOLR3P41439 243 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 PPT1P50897 306 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ATP1B3P54709 279 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 HHEXQ03014 270 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 C2orf76Q3KRA6 126 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 YIF1BQ5BJH7 314 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 PRAMEF9Q5VWM5 478 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 SPRED1Q7Z699 444 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 OR5H6Q8NGV6 325 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TSACCQ96A04 125 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 AMDHD1Q96NU7 426 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 NECTIN4Q96NY8 510 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 OCSTAMPQ9BR26 566 aa4.49□□□□□ -1.69
RC3H1-201ENST00000258349 ACSS1Q9NUB1 689 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-201ENST00000258349 TRAV27A0A087WT01 109 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 SULT2B1O00204 365 aa4.48□□□□□ -1.69
RC3H1-201ENST00000258349 PMS2P2O95744 297 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms