RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SCN3BQ9NY72 215 aa8.57□□□□□ -1.04
NIP7-202ENST00000254941 CHRNA9Q9UGM1 479 aa8.57□□□□□ -1.04
NIP7-202ENST00000254941 TPRKBQ9Y3C4 175 aa8.57□□□□□ -1.04
NIP7-202ENST00000254941 CEP295Q9C0D2 2601 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 LAMA5O15230 3695 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 TRAV36DV7A0A075B6V5 113 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 TMEM72A0PK05 275 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 ZC3H12DA2A288 527 aaKnown RBP8.56□□□□□ -1.04
NIP7-202ENST00000254941 PTGES3LE9PB15 166 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 SURF4O15260 269 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 NKX2-8O15522 239 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 TRIM3O75382 744 aaPredicted RBP8.56□□□□□ -1.04
NIP7-202ENST00000254941 P04436 131 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 HMGN1P05114 100 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 TSPAN19P0C672 248 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 WT1P19544 449 aaPredicted RBP8.56□□□□□ -1.04
NIP7-202ENST00000254941 CCNA2P20248 432 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 ADH6P28332 368 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 RPS5P46782 204 aaKnown RBP8.56□□□□□ -1.04
NIP7-202ENST00000254941 NR1H2P55055 460 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 LTBQ06643 244 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 OCLNQ16625 522 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 ANKDD1AQ495B1 522 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 FAM69AQ5T7M9 428 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 TIGD3Q6B0B8 471 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 ZNF773Q6PK81 442 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 GALNT16Q8N428 558 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 SGCDQ92629 289 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 Q96MT0 163 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 PTDSS2Q9BVG9 487 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 FKRPQ9H9S5 495 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 WDR70Q9NW82 654 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 CLN6Q9NWW5 311 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 LRFN1Q9P244 771 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 ABI3Q9P2A4 366 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 KLK13Q9UKR3 277 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 BAIAP2Q9UQB8 552 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 HIF3AQ9Y2N7 669 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 KIAA1549Q9HCM3 1950 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 MGAQ8IWI9 3026 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 APC2O95996 2303 aa8.56□□□□□ -1.04
NIP7-202ENST00000254941 A0A087WZY1 265 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 DPPA5A6NC42 116 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 ARGFXA6NJG6 315 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 CLCA1A8K7I4 914 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 ZNF208O43345 1280 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 TLX2O43763 284 aaPredicted RBP8.55□□□□□ -1.04
NIP7-202ENST00000254941 FAM20BO75063 409 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 NEURL1O76050 574 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 NDUFB2O95178 105 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 MT-ATP6P00846 226 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 HTR1AP08908 422 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 SLC6A6P31641 620 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 CD96P40200 585 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 CASRP41180 1078 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 EIF1P41567 113 aaKnown RBP8.55□□□□□ -1.04
NIP7-202ENST00000254941 RPL5P46777 297 aaKnown RBP8.55□□□□□ -1.04
NIP7-202ENST00000254941 MASP1P48740 699 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 PRPS1P60891 318 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 OC90Q02509 493 aaPredicted RBP8.55□□□□□ -1.04
NIP7-202ENST00000254941 FOXF1Q12946 379 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 TUBA3CQ13748 450 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 SYT14P1Q58G82 188 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 C1orf140Q5VVS0 124 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 C1QL3Q5VWW1 255 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 MEDAGQ5VYS4 303 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 TUBA3EQ6PEY2 450 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 C10orf53Q8N6V4 93 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 ZNF540Q8NDQ6 660 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 OR1J4Q8NGS1 313 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 TMEM163Q8TC26 289 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 IPCEF1Q8WWN9 437 aaPredicted RBP8.55□□□□□ -1.04
NIP7-202ENST00000254941 ZBTB8AQ96BR9 441 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 GNRHR2Q96P88 292 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 UTP23Q9BRU9 249 aaKnown RBP8.55□□□□□ -1.04
NIP7-202ENST00000254941 CCNB1IP1Q9NPC3 277 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 FKBP14Q9NWM8 211 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 PSORS1C1Q9UIG5 152 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 ZNF229Q9UJW7 825 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 PRRC2CQ9Y520 2896 aaKnown RBP8.55□□□□□ -1.04
NIP7-202ENST00000254941 DNAJC13O75165 2243 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 A6NHS1 94 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 FAM47E-STBD1D6RA91 191 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 G3V3Y1 287 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 OR2T1O43869 369 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 MRPS14O60783 128 aaKnown RBP8.55□□□□□ -1.04
NIP7-202ENST00000254941 ENTPD6O75354 484 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 CBR3O75828 277 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 BGLAPP02818 100 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 PRKAR1AP10644 381 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 PEPDP12955 493 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 UQCRC1P31930 480 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 GRK5P34947 590 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 DSCR4P56555 118 aaPredicted RBP8.55□□□□□ -1.04
NIP7-202ENST00000254941 FOXC1Q12948 553 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 AGAP7PQ5VUJ5 663 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 SPINK14Q6IE38 97 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 OR6S1Q8NH40 331 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 POC1BQ8TC44 478 aa8.55□□□□□ -1.04
NIP7-202ENST00000254941 PLEKHA8Q96JA3 519 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms