RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 TMEM5Q9Y2B1 443 aa12.64□□□□□ -0.39
SEC61B-201ENST00000223641 SLC6A5Q9Y345 797 aa12.64□□□□□ -0.39
SEC61B-201ENST00000223641 HDGFL3Q9Y3E1 203 aa12.64□□□□□ -0.39
SEC61B-201ENST00000223641 TLN1Q9Y490 2541 aaKnown RBP12.63□□□□□ -0.39
SEC61B-201ENST00000223641 ENO4A6NNW6 628 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 H3BML4 177 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 CDC42EP2O14613 210 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 EI24O14681 340 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 HPRP00739 348 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 BGLAPP02818 100 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 TSPAN19P0C672 248 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 IMPDH2P12268 514 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 PEPDP12955 493 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 IFI30P13284 250 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 BMP7P18075 431 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 MAKP20794 623 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 PTNP21246 168 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 FPR3P25089 353 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
SEC61B-201ENST00000223641 ALDH3A2P51648 485 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 CLDN18P56856 261 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 COX10Q12887 443 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 TSPAN31Q12999 210 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 DAG1Q14118 895 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 LY6DQ14210 128 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 ZNF74Q16587 644 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 CTU2Q2VPK5 515 aaKnown RBP12.63□□□□□ -0.39
SEC61B-201ENST00000223641 OTUD3Q5T2D3 398 aaPredicted RBP12.63□□□□□ -0.39
SEC61B-201ENST00000223641 FAM69AQ5T7M9 428 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 PACRGLQ8N7B6 248 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 MFSD8Q8NHS3 518 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 GNPDA2Q8TDQ7 276 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 DNAJC9Q8WXX5 260 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 ABTB1Q969K4 478 aaPredicted RBP12.63□□□□□ -0.39
SEC61B-201ENST00000223641 MIB2Q96AX9 1013 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 SDCCAG3Q96C92 435 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 FAM46AQ96IP4 442 aaKnown RBP12.63□□□□□ -0.39
SEC61B-201ENST00000223641 NIPSNAP1Q9BPW8 284 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 RBM4BQ9BQ04 359 aaKnown RBP12.63□□□□□ -0.39
SEC61B-201ENST00000223641 RBM4Q9BWF3 364 aaKnown RBP12.63□□□□□ -0.39
SEC61B-201ENST00000223641 SMURF2Q9HAU4 748 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 KRCC1Q9NPI7 259 aaPredicted RBP12.63□□□□□ -0.39
SEC61B-201ENST00000223641 LUZP4Q9P127 313 aa12.63□□□□□ -0.39
SEC61B-201ENST00000223641 DNAJC13O75165 2243 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 A0A0J9YW62 118 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 GJE1A6NN92 205 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 LRRN3E7EW58 273 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 KPNA4O00629 521 aaPredicted RBP12.62□□□□□ -0.39
SEC61B-201ENST00000223641 DLGAP1O14490 977 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 AQP7O14520 342 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 AHSA1O95433 338 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 PMS2P2O95744 297 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 MT-ATP6P00846 226 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 TP53P04637 393 aaPredicted RBP12.62□□□□□ -0.39
SEC61B-201ENST00000223641 ASAH2BP0C7U1 165 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 CPN1P15169 458 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 ZNF708P17019 499 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 RPS5P46782 204 aaKnown RBP12.62□□□□□ -0.39
SEC61B-201ENST00000223641 STARP49675 285 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 TDGF1P3P51864 188 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 CLDN20P56880 219 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 C19orf57Q0VDD7 668 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 MYBPHQ13203 477 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 FHL1Q13642 323 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 LRRC36Q1X8D7 754 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 TMEM176BQ3YBM2 270 aaPredicted RBP12.62□□□□□ -0.39
SEC61B-201ENST00000223641 KRTCAP3Q53RY4 240 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 FAM180AQ6UWF9 173 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 TMPPEQ6ZT21 453 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 ESPNLQ6ZVH7 1005 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 CHERPQ8IWX8 916 aaKnown RBP12.62□□□□□ -0.39
SEC61B-201ENST00000223641 CDK20Q8IZL9 346 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 ATG16L2Q8NAA4 619 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 FAR1Q8WVX9 515 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 SGTBQ96EQ0 304 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 KLHL15Q96M94 604 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 GPR137Q96N19 417 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 MOGAT1Q96PD6 335 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 TIMP4Q99727 224 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 LDAHQ9H6V9 325 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 TMEM185BQ9H7F4 350 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 FKRPQ9H9S5 495 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 SPRR3Q9UBC9 169 aa12.62□□□□□ -0.39
SEC61B-201ENST00000223641 KIAA1549Q9HCM3 1950 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 A0A1W2PNR3 127 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 LIPT2A6NK58 231 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 NPIPA5E9PKD4 350 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 H0YJX3 145 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 PTP4A3O75365 173 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 OR7A10O76100 309 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 CH25HO95992 272 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 OPN1LWP04000 364 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 FUT1P19526 365 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 POU3F2P20265 443 aaPredicted RBP12.61□□□□□ -0.39
SEC61B-201ENST00000223641 GSTM3P21266 225 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 SFTPDP35247 375 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 IDUAP35475 653 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 GPR4P46093 362 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 SLC9A3P48764 834 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 SUCLG1P53597 346 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms