RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 KIAA0141Q14154 515 aaPredicted RBP13.57□□□□□ -0.24
PTPRA-201ENST00000216877 ALG11Q2TAA5 492 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 DNAJA3Q96EY1 480 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 C14orf144Q96I85 54 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 TMEM68Q96MH6 324 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 CPEB1Q9BZB8 566 aaKnown RBP13.57□□□□□ -0.24
PTPRA-201ENST00000216877 C11orf49Q9H6J7 331 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 EPHA6Q9UF33 1036 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 GXYLT2A0PJZ3 443 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 GGT3PA6NGU5 568 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 ARL6IP5O75915 188 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 IGLV3-25P01717 112 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 KCNE1P15382 129 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 VAMP1P23763 118 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 NAA10P41227 235 aaPredicted RBP13.57□□□□□ -0.24
PTPRA-201ENST00000216877 PNLIPRP2P54317 469 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 ARF5P84085 180 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 MACC1Q6ZN28 852 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 EID2BQ96D98 161 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 NTNG1Q9Y2I2 539 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 ADH1CP00326 375 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 EDN3P14138 238 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 EDNRAP25101 427 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 GAS1P54826 345 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 TMEM44Q2T9K0 475 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 FUT10Q6P4F1 479 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 UBAC2Q8NBM4 344 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 CD99L2Q8TCZ2 262 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 RGP1Q92546 391 aaPredicted RBP13.57□□□□□ -0.24
PTPRA-201ENST00000216877 AKR1E2Q96JD6 320 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 C8orf33Q9H7E9 229 aaPredicted RBP13.57□□□□□ -0.24
PTPRA-201ENST00000216877 ABRACLQ9P1F3 81 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 PISDQ9UG56 409 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 CNTRLQ7Z7A1 2325 aa13.57□□□□□ -0.24
PTPRA-201ENST00000216877 A0A0U1RQF3 1178 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 SNRPGP15A8MWD9 76 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 GABARAPH6UMI1 98 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 ASGR1P07306 291 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 C6P13671 934 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 BMP7P18075 431 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 FUT1P19526 365 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 AVPR2P30518 371 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 SP3Q02447 781 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 IRF4Q15306 451 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 NEIL2Q969S2 332 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 BHLHE41Q9C0J9 482 aaPredicted RBP13.56□□□□□ -0.24
PTPRA-201ENST00000216877 CCDC86Q9H6F5 360 aaKnown RBP13.56□□□□□ -0.24
PTPRA-201ENST00000216877 FN3KRPQ9HA64 309 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 TCF7L1Q9HCS4 588 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 A4GNTQ9UNA3 340 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 CDHR4A6H8M9 788 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 RFPL4AA6NLU0 287 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 RFPL4AL1F8VTS6 287 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 NDUFB6O95139 128 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 PCDH8O95206 1070 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 EDNRBP24530 442 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 RAB5CP51148 216 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 DHODHQ02127 395 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 ACTBL2Q562R1 376 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 UQCC3Q6UW78 93 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 ADCK2Q7Z695 626 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 SULT4A1Q9BR01 284 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 RNF208Q9H0X6 261 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 FKRPQ9H9S5 495 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 KCNE1BA0A087WTH5 132 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 TRBV2A0A0J9YWF9 115 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 ARRDC5A6NEK1 342 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 COLCA2A8K830 154 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 UBE2CO00762 179 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 F2P00734 622 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 THEGLP0DJG4 465 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 SAGP10523 405 aaPredicted RBP13.56□□□□□ -0.24
PTPRA-201ENST00000216877 RPA2P15927 270 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 ANK1P16157 1881 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 POU3F4P49335 361 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 RAE1P78406 368 aaKnown RBP13.56□□□□□ -0.24
PTPRA-201ENST00000216877 SEMA6DQ8NFY4 1073 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 AUTS2Q8WXX7 1259 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 HIST1H2BAQ96A08 127 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 SPG21Q9NZD8 308 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 GNG8Q9UK08 70 aa13.56□□□□□ -0.24
PTPRA-201ENST00000216877 CARNS1A5YM72 827 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 TSTD3H0UI37 97 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 AP4M1O00189 453 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 ITGA10O75578 1167 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 ERAL1O75616 437 aaKnown RBP13.55□□□□□ -0.24
PTPRA-201ENST00000216877 RPP14O95059 124 aaKnown RBP13.55□□□□□ -0.24
PTPRA-201ENST00000216877 SFTA3P0C7M3 94 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 CDK2P24941 298 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 HOXD9P28356 352 aaPredicted RBP13.55□□□□□ -0.24
PTPRA-201ENST00000216877 TAF10Q12962 218 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 SLBPQ14493 270 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTPRA-201ENST00000216877 TRAM1Q15629 374 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 MAPK14Q16539 360 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 FAM219AQ8IW50 185 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 OR2T33Q8NG76 320 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 C16orf78Q8WTQ4 265 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 RAB7BQ96AH8 199 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 ARSGQ96EG1 525 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 PTPN18Q99952 460 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms