RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MARCH3Q86UD3 253 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 CMASQ8NFW8 434 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 OR52N5Q8NH56 324 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 ATRNO75882 1429 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 PPLO60437 1756 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF736B4DX44 427 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 TNFSF15O95150 251 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 TFP02787 698 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 HLCSP50747 726 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 ATP1B3P54709 279 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF662Q6ZS27 426 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 FOXRED1Q96CU9 486 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 FER1L6-AS2Q96M78 137 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 PARP12Q9H0J9 701 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 SSTR2P30874 369 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 HTR6P50406 440 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 PHLDA2Q53GA4 152 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 OR8G2PQ6IF36 304 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 MDGA1Q8NFP4 955 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 SELENOIQ9C0D9 397 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 GSTO2Q9H4Y5 243 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 FAM124BQ9H5Z6 455 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 ARPC1BO15143 372 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 OR8U8P0C7N1 319 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 FABP6P51161 128 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 GABREP78334 506 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 CMTM2Q8TAZ6 248 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 CLSTN3Q9BQT9 956 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 OCSTAMPQ9BR26 566 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 WDR83Q9BRX9 315 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 EGLN3Q9H6Z9 239 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 A0A1W2PQL4 384 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 A6NIZ1 184 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF728P0DKX0 622 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 ETV4P43268 484 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 RRADP55042 308 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 PRPS1P60891 318 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 RAP1BP61224 184 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 RAP1AP62834 184 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 LRRC26Q2I0M4 334 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 NR4A3Q92570 626 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 EBF1Q9UH73 591 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 ADAMTS6Q9UKP5 1117 aa16.65■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF593O00488 134 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 BHLHE40O14503 412 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 IL7P13232 177 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 TECRLQ5HYJ1 363 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 ANKRD54Q6NXT1 300 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 UNC5DQ6UXZ4 953 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 LRRTM3Q86VH5 581 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 MGLLQ99685 303 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 DMRT3Q9NQL9 472 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 DMAC2Q9NW81 257 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 A0A1W2PRD5 423 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 A0A1W2PRF3 423 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 A0A1W2PRM7 423 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 NDUFB2O95178 105 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 PRSS3P35030 304 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 ERVFC1P60507 584 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 KCND1Q9NSA2 647 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 QPCTLQ9NXS2 382 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 ARHGEF28Q8N1W1 1705 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF749O43361 778 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 MAGEB1P43366 347 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 ANKRD34AQ69YU3 496 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 NPSR1Q6W5P4 371 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 ARSGQ96EG1 525 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 PLPPR2Q96GM1 343 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 C1orf74Q96LT6 269 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF286AQ9HBT8 521 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 SSUH2Q9Y2M2 353 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 IL13RA1P78552 427 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 CLINT1Q14677 625 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 HACD4Q5VWC8 232 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 TUBA3EQ6PEY2 450 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 KCNIP4Q6PIL6 250 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 NPWQ8N729 165 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF71Q9NQZ8 489 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 DNMT3BQ9UBC3 853 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 LOXHD1Q8IVV2 1947 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 NUDT19A8MXV4 375 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 HSD17B7P56937 341 aa16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 GK2Q14410 553 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 ZMAT3Q9HA38 289 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-227ENST00000636549 TXNL1O43396 289 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CTRB1P17538 263 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 OR1Q1Q15612 314 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 TBC1D28Q2M2D7 210 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CDCA2Q69YH5 1023 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 RPL7L1Q6DKI1 246 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CTRB2Q6GPI1 263 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 Q6ZPB1 254 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 OR7G2Q8NG99 324 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 OR4K5Q8NGD3 323 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 FIBINQ8TAL6 211 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 C8orf44Q96CB5 159 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 FN3KRPQ9HA64 309 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 XRCC3O43542 346 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 ALOX12BO75342 701 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 DPY19L2P1Q6NXN4 242 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 236.6 ms