RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MRPL2Q5T653 305 aaKnown RBP15.86■□□□□ 0.13
PNKP-225ENST00000636214 FBXW9Q5XUX1 488 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 ADAM5Q6NVV9 412 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 MSANTD1Q6ZTZ1 278 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 P2RY8Q86VZ1 359 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 ADGRG3Q86Y34 549 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 PIWIL2Q8TC59 973 aaKnown RBP15.86■□□□□ 0.13
PNKP-225ENST00000636214 ITCHQ96J02 903 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 ARL5BQ96KC2 179 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 OR11A1Q9GZK7 315 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 ALG2Q9H553 416 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 THUMPD1Q9NXG2 353 aaKnown RBP15.86■□□□□ 0.13
PNKP-225ENST00000636214 TRAPPC4Q9Y296 219 aa15.86■□□□□ 0.13
PNKP-225ENST00000636214 IGHV1-2P23083 117 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 CXCR1P25024 350 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 TACR3P29371 465 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 POLR2JP52435 117 aaKnown RBP15.85■□□□□ 0.13
PNKP-225ENST00000636214 DSTNP60981 165 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 STX1BP61266 288 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 LARS2Q15031 903 aaKnown RBP15.85■□□□□ 0.13
PNKP-225ENST00000636214 SLC9B1Q4ZJI4 515 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 CASP12Q6UXS9 341 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 MAELQ96JY0 434 aaKnown RBP15.85■□□□□ 0.13
PNKP-225ENST00000636214 RAD21L1Q9H4I0 556 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 TMBIM4Q9HC24 238 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 FAIMQ9NVQ4 179 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 PARPBPQ9NWS1 579 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 ASB6Q9NWX5 421 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 UPB1Q9UBR1 384 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 OSGIN1Q9UJX0 560 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 ABCA2Q9BZC7 2435 aa15.85■□□□□ 0.13
PNKP-225ENST00000636214 PLCE1Q9P212 2302 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 TMEM72A0PK05 275 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 TRIM64A6NGJ6 449 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 TRIM64BA6NI03 449 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 FAAHO00519 579 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 AP3D1O14617 1153 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 RAD51DO75771 328 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 IGHV3-9P01782 118 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 BCHEP06276 602 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 PAX1P15863 534 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 HOXB4P17483 251 aaPredicted RBP15.84■□□□□ 0.13
PNKP-225ENST00000636214 NCF2P19878 526 aaPredicted RBP15.84■□□□□ 0.13
PNKP-225ENST00000636214 COX5AP20674 150 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 RPS4Y1P22090 263 aaKnown RBP15.84■□□□□ 0.13
PNKP-225ENST00000636214 CDH11P55287 796 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 EPS8Q12929 822 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 ZSWIM7Q19AV6 140 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 ZNF672Q499Z4 452 aaPredicted RBP15.84■□□□□ 0.13
PNKP-225ENST00000636214 KLHL17Q6TDP4 642 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 CCDC103Q8IW40 242 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 MIER2Q8N344 545 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 CADM2Q8N3J6 435 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 KBTBD8Q8NFY9 601 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 OR52P1PQ8NH57 321 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 SMAP2Q8WU79 429 aaPredicted RBP15.84■□□□□ 0.13
PNKP-225ENST00000636214 ZNF75CPQ92670 426 aaPredicted RBP15.84■□□□□ 0.13
PNKP-225ENST00000636214 TLCD1Q96CP7 247 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 TPT1P8Q9HAU6 139 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 ZNF701Q9NV72 531 aaPredicted RBP15.84■□□□□ 0.13
PNKP-225ENST00000636214 POU2F3Q9UKI9 436 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 ZNF232Q9UNY5 417 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 SLC9A8Q9Y2E8 581 aa15.84■□□□□ 0.13
PNKP-225ENST00000636214 ZNF716A6NP11 495 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 GPIP06744 558 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 ZCCHC18P0CG32 403 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 SLC16A1P53985 500 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 ETFDHQ16134 617 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 OR7E24Q6IFN5 339 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 ZNF433Q8N7K0 673 aaPredicted RBP15.83■□□□□ 0.12
PNKP-225ENST00000636214 TAPBPLQ9BX59 468 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 SDR39U1Q9NRG7 319 aaPredicted RBP15.83■□□□□ 0.12
PNKP-225ENST00000636214 TAS2R16Q9NYV7 291 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 PRDM4Q9UKN5 801 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 USH1CQ9Y6N9 552 aa15.83■□□□□ 0.12
PNKP-225ENST00000636214 HEATR1Q9H583 2144 aaKnown RBP15.82■□□□□ 0.12
PNKP-225ENST00000636214 JMJD1CQ15652 2540 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 DPRXA6NFQ7 191 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 OR5H1A6NKK0 313 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 C5orf58C9J3I9 102 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 KLF11O14901 512 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 POLR3GO15318 223 aaPredicted RBP15.82■□□□□ 0.12
PNKP-225ENST00000636214 ADAM11O75078 769 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 LY6G6DO95868 133 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 C1QCP02747 245 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 ETFAP13804 333 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 EDNRAP25101 427 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 IDUAP35475 653 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 FAPQ12884 760 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 VEZF1Q14119 521 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 TMEM108Q6UXF1 575 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 ZNF836Q6ZNA1 936 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 DEPDC4Q8N2C3 294 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 LRRC8CQ8TDW0 803 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 IGFBPL1Q8WX77 278 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 RADILQ96JH8 1075 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 MGAT4BQ9UQ53 548 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 ZNF443Q9Y2A4 671 aaPredicted RBP15.82■□□□□ 0.12
PNKP-225ENST00000636214 IFT52Q9Y366 437 aa15.82■□□□□ 0.12
PNKP-225ENST00000636214 A0A0G2JPF8 293 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms