RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 GRK6P43250 576 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 PPP5CP53041 499 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 NRG3P56975 720 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 RPS7P62081 194 aaKnown RBP20.14■□□□□ 0.81
PNKP-220ENST00000627232 GPR50Q13585 617 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 TRA2AQ13595 282 aaKnown RBP eCLIP20.14■□□□□ 0.81
PNKP-220ENST00000627232 ZNF74Q16587 644 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 TRIM61Q5EBN2 209 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 CD200R1LQ6Q8B3 271 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 LRRC17Q8N6Y2 441 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 SLC26A1Q9H2B4 701 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 OR51V1Q9H2C8 321 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 CRNNQ9UBG3 495 aaPredicted RBP20.14■□□□□ 0.81
PNKP-220ENST00000627232 SLC6A5Q9Y345 797 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 IER3IP1Q9Y5U9 82 aa20.14■□□□□ 0.81
PNKP-220ENST00000627232 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.13■□□□□ 0.81
PNKP-220ENST00000627232 TRDV1A0A1B0GX56 115 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 NTN3O00634 580 aaPredicted RBP20.13■□□□□ 0.81
PNKP-220ENST00000627232 HCRTR2O43614 444 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 FADS1O60427 444 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 IL1AP01583 271 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 GAAP10253 952 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 PGCP20142 388 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 FGF9P31371 208 aaPredicted RBP20.13■□□□□ 0.81
PNKP-220ENST00000627232 RPL4P36578 427 aaKnown RBP20.13■□□□□ 0.81
PNKP-220ENST00000627232 RPS19P39019 145 aaKnown RBP20.13■□□□□ 0.81
PNKP-220ENST00000627232 CAPZA2P47755 286 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 EMP2P54851 167 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 RPS25P62851 125 aaKnown RBP20.13■□□□□ 0.81
PNKP-220ENST00000627232 GALEQ14376 348 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 ZNF791Q3KP31 576 aaPredicted RBP20.13■□□□□ 0.81
PNKP-220ENST00000627232 FCRLBQ6BAA4 426 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 DESI1Q6ICB0 168 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 BTLAQ7Z6A9 289 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 MARCH3Q86UD3 253 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 TMEM99Q8N816 258 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 OR52E2Q8NGJ4 325 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 OR2I1PQ8NGU4 316 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 NUBPLQ8TB37 319 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 MED18Q9BUE0 208 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 NUAK2Q9H093 628 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 NRIP3Q9NQ35 241 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 HIF3AQ9Y2N7 669 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 EXPH5Q8NEV8 1989 aa20.13■□□□□ 0.81
PNKP-220ENST00000627232 DAPL1A0PJW8 107 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 ZC3H12DA2A288 527 aaKnown RBP20.12■□□□□ 0.81
PNKP-220ENST00000627232 CDC40O60508 579 aaKnown RBP eCLIP20.12■□□□□ 0.81
PNKP-220ENST00000627232 SULT1C4O75897 302 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 SBK2P0C263 348 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 HIST1H1CP16403 213 aaKnown RBP20.12■□□□□ 0.81
PNKP-220ENST00000627232 TACR3P29371 465 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 RORCP51449 518 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 ACTC1P68032 377 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 ACTA1P68133 377 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 ZNF45Q02386 682 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 EFR3AQ14156 821 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 IL11RAQ14626 422 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 RGS21Q2M5E4 152 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 PHF19Q5T6S3 580 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 DTWD2Q8NBA8 298 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 FAM98AQ8NCA5 519 aaKnown RBP20.12■□□□□ 0.81
PNKP-220ENST00000627232 APCDD1LQ8NCL9 501 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 OR5W2Q8NH69 310 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 CHPT1Q8WUD6 406 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 ALG8Q9BVK2 526 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 RTN4RQ9BZR6 473 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 ADGRL4Q9HBW9 690 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 MMP25Q9NPA2 562 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 ASB6Q9NWX5 421 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 GSTK1Q9Y2Q3 226 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 IGHV3-20A0A0C4DH32 117 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 D6RAR5 112 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 LRRN3E7EW58 273 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 LALBAP00709 142 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 APEHP13798 732 aaKnown RBP20.12■□□□□ 0.81
PNKP-220ENST00000627232 GALP22466 123 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 EVI2BP34910 448 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 ETV6P41212 452 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 EGR4Q05215 589 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 LGALS3BPQ08380 585 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 CRTC2Q53ET0 693 aaPredicted RBP20.12■□□□□ 0.81
PNKP-220ENST00000627232 LCN1P1Q5VSP4 162 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 B3GLCTQ6Y288 498 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 MISPQ8IVT2 679 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 CYB561A3Q8NBI2 242 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 C1GALT1C1Q96EU7 318 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 KCTD7Q96MP8 289 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 NDEL1Q9GZM8 345 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 PCDHGB6Q9Y5F9 930 aa20.12■□□□□ 0.81
PNKP-220ENST00000627232 DNAH14Q0VDD8 3507 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 IMPA2O14732 288 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 ASAH2BP0C7U1 165 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 P2RX1P51575 399 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 SLC16A1P53985 500 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 CBFBQ13951 182 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 GGTLC2Q14390 218 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 C11orf91Q3C1V1 193 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 ATP6V1C2Q8NEY4 427 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 OR4K13Q8NH42 304 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 OR8K3Q8NH51 312 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms