RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 DNPH1O43598 174 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 DNAJA2O60884 412 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 BCAS1O75363 584 aaPredicted RBP12.78□□□□□ -0.36
PNKP-218ENST00000625299 STX11O75558 287 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 UGT2B17O75795 530 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 CRYAAP02489 173 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 ABHD2P08910 425 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 MATN1P21941 496 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 MPGP29372 298 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 ETF1P62495 437 aaKnown RBP12.78□□□□□ -0.36
PNKP-218ENST00000625299 PTGR1Q14914 329 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 ADIPOQQ15848 244 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 ZNF141Q15928 474 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 LSM12Q3MHD2 195 aaKnown RBP12.78□□□□□ -0.36
PNKP-218ENST00000625299 C16orf62Q7Z3J2 963 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 GRINAQ7Z429 371 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 HMGN2P46Q86SG4 172 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 CLEC4FQ8N1N0 589 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 C3orf56Q8N813 242 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 MOAP1Q96BY2 351 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 SLC38A2Q96QD8 506 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 SERHL2Q9H4I8 314 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 ATAD3AQ9NVI7 634 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 TMEM181Q9P2C4 612 aa12.78□□□□□ -0.36
PNKP-218ENST00000625299 MEGF8Q7Z7M0 2845 aa12.77□□□□□ -0.36
PNKP-218ENST00000625299 TMEM233B4DJY2 109 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 PLIN3O60664 434 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 LILRA1O75019 489 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 KRT33AO76009 404 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 ERCC1P07992 297 aaPredicted RBP12.77□□□□□ -0.37
PNKP-218ENST00000625299 CPA3P15088 417 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 MAPK1P28482 360 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 PGM1P36871 562 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 SLC1A3P43003 542 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 PPOXP50336 477 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 IDH3GP51553 393 aaPredicted RBP12.77□□□□□ -0.37
PNKP-218ENST00000625299 CDH15P55291 814 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 TRIP10Q15642 601 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 MAPK14Q16539 360 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 ZSWIM7Q19AV6 140 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 CCDC153Q494R4 210 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 KANK2Q63ZY3 851 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 ZCCHC24Q8N2G6 241 aaKnown RBP12.77□□□□□ -0.37
PNKP-218ENST00000625299 KRTCAP2Q8N6L1 136 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 PSMA8Q8TAA3 256 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 TWIST2Q8WVJ9 160 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 HPS1Q92902 700 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 ZMYND19Q96E35 227 aaPredicted RBP12.77□□□□□ -0.37
PNKP-218ENST00000625299 SLC35G5Q96KT7 338 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 NAA11Q9BSU3 229 aaPredicted RBP12.77□□□□□ -0.37
PNKP-218ENST00000625299 C1orf50Q9BV19 199 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 PLK3Q9H4B4 646 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 OXSMQ9NWU1 459 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 DNAJC15Q9Y5T4 150 aa12.77□□□□□ -0.37
PNKP-218ENST00000625299 MGAM2Q2M2H8 2515 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 hCG_2039718K7EN88 272 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 PIP5K1BO14986 540 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 RIPK2O43353 540 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 PEX11AO75192 247 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 AK1P00568 194 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 TACSTD2P09758 323 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 IFNGR1P15260 489 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 EGR1P18146 543 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 GIFP27352 417 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
PNKP-218ENST00000625299 TUBA1BP68363 451 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 TUBA4AP68366 448 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 SLC35A1P78382 337 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 EFNB3Q15768 340 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 FAM153CQ494X1 144 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 TUBA1AQ71U36 451 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 AAED1Q7RTV5 226 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 ADGRG3Q86Y34 549 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 SEMA6DQ8NFY4 1073 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 AGR3Q8TD06 166 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 MZB1Q8WU39 189 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 KATNB1Q9BVA0 655 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 ZNF350Q9GZX5 532 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 DYNLRB1Q9NP97 96 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 SLC35A3Q9Y2D2 325 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 PCDHB14Q9Y5E9 798 aa12.76□□□□□ -0.37
PNKP-218ENST00000625299 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 RNF103-CHMP3A0A140T963 221 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 TMEM72A0PK05 275 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 SH3PXD2BA1X283 911 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 DUXAA6NLW8 204 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 EIF1BO60739 113 aaKnown RBP12.75□□□□□ -0.37
PNKP-218ENST00000625299 PDE5AO76074 875 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 LGI1O95970 557 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 IMPDH2P12268 514 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 PCMT1P22061 227 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 IDH2P48735 452 aaKnown RBP12.75□□□□□ -0.37
PNKP-218ENST00000625299 CLK1P49759 484 aaKnown RBP12.75□□□□□ -0.37
PNKP-218ENST00000625299 DVL1P1P54792 670 aaPredicted RBP12.75□□□□□ -0.37
PNKP-218ENST00000625299 HBA1P69905 142 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 H3F3AP84243 136 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 SLC17A1Q14916 467 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 ARHGAP11BQ3KRB8 267 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 TBRG1Q3YBR2 411 aa12.75□□□□□ -0.37
PNKP-218ENST00000625299 OTUD3Q5T2D3 398 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms