RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 LINGO3P0C6S8 592 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 TMIGD3P0DMS9 266 aaPredicted RBP17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 OR1E2P47887 323 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 SLC6A8P48029 635 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 DSCR4P56555 118 aaPredicted RBP17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 SRYQ05066 204 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 GANABQ14697 944 aaKnown RBP17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 MTX3Q5HYI7 312 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 RBM45Q8IUH3 476 aaKnown RBP17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 OR6T1Q8NGN1 323 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 VANGL1Q8TAA9 524 aaPredicted RBP17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 FAM222BQ8WU58 562 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 LRGUKQ96M69 825 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 ZFP3Q96NJ6 502 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 MED17Q9NVC6 651 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 SLC9A8Q9Y2E8 581 aa17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 MRPS18CQ9Y3D5 142 aaKnown RBP17.93■□□□□ 0.46
R3HCC1-210ENST00000625275 EEF1E1-BLOC1S5C9J1V9 151 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 EEF1E1O43324 174 aaKnown RBP17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 ZIC3O60481 467 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 TPST2O60704 377 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 PGCP20142 388 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 TCEA1P23193 301 aaKnown RBP17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 ZNF41P51814 821 aaPredicted RBP17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 AGFG1P52594 562 aaKnown RBP17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 QPRTQ15274 297 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 NPTX1Q15818 432 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 PLPPR5Q32ZL2 321 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 AAGABQ6PD74 315 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 FKBP9P1Q75LS8 142 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 ADGRE4PQ86SQ3 457 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 CARM1Q86X55 608 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 KIF18BQ86Y91 864 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 SFXN2Q96NB2 322 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 TM9SF2Q99805 663 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 TRIM15Q9C019 465 aa17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 CLEC4MQ9H2X3 399 aaPredicted RBP17.92■□□□□ 0.46
R3HCC1-210ENST00000625275 MAP1AP78559 2803 aaPredicted RBP17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 FAM221AA4D161 298 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 CLCA1A8K7I4 914 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 FAAHO00519 579 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 HTR2AP28223 471 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 STARP49675 285 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 LHX2P50458 406 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 ART1P52961 327 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 IFI44LQ53G44 452 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 C1orf146Q5VVC0 180 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 GEMIN6Q8WXD5 167 aaKnown RBP17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 PYURFQ96I23 114 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 UCN2Q96RP3 112 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 NPAS1Q99742 590 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 PRR14Q9BWN1 585 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 EVA1AQ9H8M9 152 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 RASSF1Q9NS23 344 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 JKAMPQ9P055 326 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 CLCF1Q9UBD9 225 aa17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 TESQ9UGI8 421 aaKnown RBP17.91■□□□□ 0.46
R3HCC1-210ENST00000625275 A0A087WZY1 265 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 AQP12BA6NM10 295 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 A6NNC1 897 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 CIB2O75838 187 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 UQCRBP14927 111 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 NQO1P15559 274 aaKnown RBP17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 ZNF708P17019 499 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 PRKCAP17252 672 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 HK1P19367 917 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 CHMP24386 653 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 IDH2P48735 452 aaKnown RBP17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 ERFP50548 548 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 CLDN18P56856 261 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 SORDQ00796 357 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 RANBP3LQ86VV4 465 aaPredicted RBP17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 AQP12AQ8IXF9 295 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 ZNF563Q8TA94 476 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 WNT2BQ93097 391 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 RAB3IPQ96QF0 476 aaPredicted RBP17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 SFXN3Q9BWM7 321 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 RPH3AQ9Y2J0 694 aaPredicted RBP17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 ACANP16112 2415 aa17.9■□□□□ 0.46
R3HCC1-210ENST00000625275 TUBAL3A6NHL2 446 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 SHISA8B8ZZ34 492 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 ANKRD65E5RJM6 399 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 SEMG1P04279 462 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 IST1P53990 364 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 SESN3P58005 492 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 FOXF1Q12946 379 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 FOXF2Q12947 444 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 TSPYL5Q86VY4 417 aaPredicted RBP17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 CADM2Q8N3J6 435 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 OR5M1Q8NGP8 315 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 ST8SIA1Q92185 356 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 NINJ1Q92982 152 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 ZBTB8AQ96BR9 441 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 AMBRA1Q9C0C7 1298 aa17.89■□□□□ 0.45
R3HCC1-210ENST00000625275 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.88■□□□□ 0.45
R3HCC1-210ENST00000625275 ETV2O00321 342 aaPredicted RBP17.88■□□□□ 0.45
R3HCC1-210ENST00000625275 RRP9O43818 475 aaKnown RBP17.88■□□□□ 0.45
R3HCC1-210ENST00000625275 RCBTB2O95199 551 aa17.88■□□□□ 0.45
R3HCC1-210ENST00000625275 NTN1O95631 604 aa17.88■□□□□ 0.45
R3HCC1-210ENST00000625275 IFNW1P05000 195 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms