RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SURF4O15260 269 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 TMEM127O75204 238 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 MPIG6BO95866 241 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 FUT1P19526 365 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 TRAPPC6BQ86SZ2 158 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 CMIPQ8IY22 773 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 KLHDC8AQ8IYD2 350 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 MDGA1Q8NFP4 955 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 OR10R2Q8NGX6 335 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 RLIMQ9NVW2 624 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 SPHK1Q9NYA1 384 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 COCHO43405 550 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 SLC19A1P41440 591 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 CX3CR1P49238 355 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 SUOXP51687 545 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 KIAA0319Q5VV43 1072 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 MDGA2Q7Z553 956 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 PXYLP1Q8TE99 480 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 CYB5D2Q8WUJ1 264 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 RAB7BQ96AH8 199 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 ZNF442Q9H7R0 627 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 ZNF443Q9Y2A4 671 aaPredicted RBP8.33□□□□□ -1.08
VCL-206ENST00000623461 FBXO7Q9Y3I1 522 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 ZNF337Q9Y3M9 751 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 PLEKHM1Q9Y4G2 1056 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 MAGEB4O15481 346 aaPredicted RBP8.33□□□□□ -1.08
VCL-206ENST00000623461 B4GALT2O60909 372 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 OR2C1O95371 312 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 TSPAN12O95859 305 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 TNFP01375 233 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 RPL17P18621 184 aaKnown RBP8.33□□□□□ -1.08
VCL-206ENST00000623461 ID2Q02363 134 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 PDSS1Q5T2R2 415 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 IER5LQ5T953 404 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 LCN10Q6JVE6 187 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 ADAM5Q6NVV9 412 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 FAM26EQ8N5C1 309 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 OR1S1Q8NH92 325 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 TEPSINQ96N21 525 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 RNF167Q9H6Y7 350 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 MOKQ9UQ07 419 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 DOCK2Q92608 1830 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 MYO18AQ92614 2054 aaKnown RBP8.33□□□□□ -1.08
VCL-206ENST00000623461 FEZF1A0PJY2 475 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 DRGXA6NNA5 263 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 SLC31A1O15431 190 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 F10P00742 488 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 SERPINA5P05154 406 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 SLC10A3P09131 477 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 CBR1P16152 277 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 MBOAT2Q6ZWT7 520 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 SCAMP4Q969E2 229 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 SEC22AQ96IW7 307 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 PITX2Q99697 317 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 OCSTAMPQ9BR26 566 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 STEAP1Q9UHE8 339 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 TRAV20A0A0B4J274 112 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 TMEM88BA6NKF7 163 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SRP9P49458 86 aaKnown RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 CCL23P55773 120 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 BDH1Q02338 343 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 PDE7AQ13946 482 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 EBPQ15125 230 aaKnown RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 SLC5A12Q1EHB4 618 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 FIGNL1Q6PIW4 674 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ZC3H14Q6PJT7 736 aaKnown RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 MFSD4AQ8N468 514 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 HORMAD2Q8N7B1 307 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 WDFY2Q96P53 400 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SLC23A1Q9UHI7 598 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ARRDC5A6NEK1 342 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 BHLHE40O14503 412 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 PRICKLE3O43900 615 aaPredicted RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 KCNJ13O60928 360 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 C8AP07357 584 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 FBXO45P0C2W1 286 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ACSM4P0C7M7 580 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ADH5P11766 374 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 KDM8Q8N371 416 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 OLIG1Q8TAK6 271 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SLC2A12Q8TD20 617 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 MIB2Q96AX9 1013 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 NICN1Q9BSH3 213 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 TRPM3Q9HCF6 1732 aaPredicted RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 HOXB5P09067 269 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 LIPCP11150 499 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 UBL4AP11441 157 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ZNF44P15621 663 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ARNTP27540 789 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 THBS2P35442 1172 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 RFX2P48378 723 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 AKR1C2P52895 323 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ZNF280AP59817 542 aaPredicted RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 GPR139Q6DWJ6 353 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 OPN5Q6U736 354 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SEMA6DQ8NFY4 1073 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 OR51L1Q8NGJ5 315 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 NECTIN4Q96NY8 510 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 IL26Q9NPH9 171 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 KLRF1Q9NZS2 232 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms