RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 KIR3DP1A8MWS1 328 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 NME6O75414 186 aaPredicted RBP12.11□□□□□ -0.47
GRIA3-208ENST00000620581 TIPRLO75663 272 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 FCGR2AP12318 317 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 CXCR1P25024 350 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 MSX2P35548 267 aaPredicted RBP12.11□□□□□ -0.47
GRIA3-208ENST00000620581 CLDN18P56856 261 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 RAC3P60763 192 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 C1orf140Q5VVS0 124 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 SPINK14Q6IE38 97 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 WDR88Q6ZMY6 472 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 DEF8Q6ZN54 512 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 USP51Q70EK9 711 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
GRIA3-208ENST00000620581 ABHD17AQ96GS6 310 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 KLHL15Q96M94 604 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 TIGARQ9NQ88 270 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 RCE1Q9Y256 329 aa12.11□□□□□ -0.47
GRIA3-208ENST00000620581 OR2M5A3KFT3 312 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 OR6C65A6NJZ3 312 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 AHRRA9YTQ3 701 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 RCBTB2O95199 551 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 CNOT4O95628 575 aaKnown RBP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 OSMP13725 252 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 MASP1P48740 699 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 RAD23AP54725 363 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 PPIAP62937 165 aaKnown RBP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 OC90Q02509 493 aaPredicted RBP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 SNCBQ16143 134 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 PAQR6Q6TCH4 344 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 LINC00696Q6ZRV3 163 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 RBM45Q8IUH3 476 aaKnown RBP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 CDK20Q8IZL9 346 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 OR4K5Q8NGD3 323 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 TRUB1Q8WWH5 349 aaKnown RBP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 OSTF1Q92882 214 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 NAA11Q9BSU3 229 aaPredicted RBP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 OR10A4Q9H209 315 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 FN3KQ9H479 309 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 CTPS2Q9NRF8 586 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 RLIMQ9NVW2 624 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 MED11Q9P086 117 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 TP53TG5Q9Y2B4 290 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 HEATR5AQ86XA9 2040 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 ARHGAP21Q5T5U3 1957 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 RIF1Q5UIP0 2472 aaKnown RBP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 AQP7P3A6NL99 342 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 CLDN24A6NM45 220 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 MRPS14O60783 128 aaKnown RBP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 PDGFAP04085 211 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 IL11P20809 199 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 EFNB1P98172 346 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 SYT14P1Q58G82 188 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 TMEM201Q5SNT2 666 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 C12orf73Q69YU5 71 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 GPR139Q6DWJ6 353 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 GALNT10Q86SR1 603 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 ZNF563Q8TA94 476 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 SARAFQ96BY9 339 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 PRRG3Q9BZD7 231 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 UCK2Q9BZX2 261 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 LIN28AQ9H9Z2 209 aaKnown RBP12.1□□□□□ -0.47
GRIA3-208ENST00000620581 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
GRIA3-208ENST00000620581 TRBV4-1A0A0J9YWV2 114 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 hCG_2039718K7EN88 272 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 AGRPO00253 132 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 MPZL2O60487 215 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 WDR1O75083 606 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 GABRA1P14867 456 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 NUP107P57740 925 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 CDK5Q00535 292 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 ARMC4Q5T2S8 1044 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 PCSK4Q6UW60 755 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 ZNF620Q6ZNG0 422 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 TMPPEQ6ZT21 453 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 OLIG3Q7RTU3 272 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 GALNTL5Q7Z4T8 443 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 GHDCQ8N2G8 530 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 OR2V1Q8NHB1 315 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 INTS12Q96CB8 462 aaKnown RBP12.09□□□□□ -0.47
GRIA3-208ENST00000620581 COQ10BQ9H8M1 238 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 MEPEQ9NQ76 525 aaPredicted RBP12.09□□□□□ -0.47
GRIA3-208ENST00000620581 CPSF4LA6NMK7 179 aaKnown RBP12.09□□□□□ -0.47
GRIA3-208ENST00000620581 AHSA1O95433 338 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 DNASE1L1P49184 302 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
GRIA3-208ENST00000620581 SEC23BQ15437 767 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 SLX4IPQ5VYV7 408 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 LPCAT4Q643R3 524 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 DPY19L2P2Q6ZN68 376 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 CHERPQ8IWX8 916 aaKnown RBP12.09□□□□□ -0.47
GRIA3-208ENST00000620581 MEIOBQ8N635 442 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 ST6GALNAC3Q8NDV1 305 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 PAPOLBQ9NRJ5 636 aaKnown RBP12.09□□□□□ -0.47
GRIA3-208ENST00000620581 KLHL21Q9UJP4 597 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 USP34Q70CQ2 3546 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 DMXL1Q9Y485 3027 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 UNC119BA6NIH7 251 aa12.09□□□□□ -0.47
GRIA3-208ENST00000620581 ZAR1LA6NP61 321 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms