RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TTC36A6NLP5 189 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF716A6NP11 495 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ETV2O00321 342 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SERPINI2O75830 405 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 UGT2B10P36537 528 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ATP4BP51164 291 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SPOCK1Q08629 439 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 HNRNPA0Q13151 305 aaKnown RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SLC25A53Q5H9E4 307 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 AP1ARQ63HQ0 302 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 TMPPEQ6ZT21 453 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SPATA21Q7Z572 469 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 TSEN54Q7Z6J9 526 aaKnown RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SLC15A3Q8IY34 581 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 DPP10Q8N608 796 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ASB5Q8WWX0 329 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 TAAR8Q969N4 342 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 MRGPRX4Q96LA9 322 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 HOXD1Q9GZZ0 328 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ACBD3Q9H3P7 528 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 CHST11Q9NPF2 352 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SNX3O60493 162 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 DIRAS1O95057 198 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 DBIP07108 87 aaKnown RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 TROVE2P10155 538 aaKnown RBP eCLIP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 COX4I1P13073 169 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 CD247P20963 164 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ASCL1P50553 236 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 CDH12P55289 794 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 OR2B6P58173 313 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 TUBA1BP68363 451 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 TUBA4AP68366 448 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SLC25A3Q00325 362 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 BCL2A1Q16548 175 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 REEP3Q6NUK4 255 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 C3orf33Q6P1S2 294 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 MTFR2Q6P444 385 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 TUBA1AQ71U36 451 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 LURAP1LQ8IV03 231 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ZIC4Q8N9L1 334 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 RNASE6Q93091 150 aaKnown RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 S100PBPQ96BU1 408 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 TM9SF2Q99805 663 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 EMC6Q9BV81 110 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 CLEC4MQ9H2X3 399 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 CCM2LQ9NUG4 571 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SELENONQ9NZV5 590 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 C7orf72A4D263 438 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF503-AS2A6NEH8 195 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 DEFB108AA8MXU0 73 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 HPRP00739 348 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ADAP00813 363 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 KRT16P08779 473 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 PGCP20142 388 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SLC1A3P43003 542 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SELENOPP49908 381 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SLC7A2P52569 658 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 RASGEF1BQ0VAM2 473 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SELENBP1Q13228 472 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 PIN1Q13526 163 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 MMEL1Q495T6 779 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 PHYHD1Q5SRE7 291 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SEZ6L2Q6UXD5 910 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 TFAP2EQ6VUC0 442 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 GRINAQ7Z429 371 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 NKAIN4Q8IVV8 208 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 MICU2Q8IYU8 434 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 MYLK2Q9H1R3 596 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 C20orf141Q9NUB4 165 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 LIPT1Q9Y234 373 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 PIP5K1CO60331 668 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 LYPD3O95274 346 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 AK1P00568 194 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 OPRM1P35372 400 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 NUDT2P50583 147 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 H3F3AP84243 136 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 TRMT5Q32P41 509 aaKnown RBP5.04□□□□□ -1.6
CPNE3-208ENST00000614678 LRRC23Q53EV4 343 aaPredicted RBP5.04□□□□□ -1.6
CPNE3-208ENST00000614678 MYPOPQ86VE0 399 aaPredicted RBP5.04□□□□□ -1.6
CPNE3-208ENST00000614678 CALHM3Q86XJ0 350 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 MISPQ8IVT2 679 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 CLDN22Q8N7P3 220 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 TXNDC15Q96J42 360 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 SFXN3Q9BWM7 321 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 SEC61A2Q9H9S3 476 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 NPAP1Q9NZP6 1156 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 SLC35A3Q9Y2D2 325 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 A0A087WZY1 265 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 A0A0G2JPF8 293 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 SH3D21A4FU49 640 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 HNRNPCL2B2RXH8 293 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 HNRNPCL3B7ZW38 293 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 C5orf58C9J3I9 102 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 HNRNPCL1O60812 293 aaKnown RBP5.04□□□□□ -1.6
CPNE3-208ENST00000614678 SS18L1O75177 396 aaPredicted RBP5.04□□□□□ -1.6
CPNE3-208ENST00000614678 RAD51DO75771 328 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 HNRNPCL4P0DMR1 293 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 POU2F1P14859 743 aa5.04□□□□□ -1.6
CPNE3-208ENST00000614678 IGHV1-2P23083 117 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms