RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 SRMP19623 302 aa12.91□□□□□ -0.34
CHD1-212ENST00000614616 CD81P60033 236 aa12.91□□□□□ -0.34
CHD1-212ENST00000614616 C19orf57Q0VDD7 668 aa12.91□□□□□ -0.34
CHD1-212ENST00000614616 GUK1Q16774 197 aa12.91□□□□□ -0.34
CHD1-212ENST00000614616 PGAM5Q96HS1 289 aa12.91□□□□□ -0.34
CHD1-212ENST00000614616 KCMF1Q9P0J7 381 aa12.91□□□□□ -0.34
CHD1-212ENST00000614616 KCTD3Q9Y597 815 aa12.91□□□□□ -0.34
CHD1-212ENST00000614616 TSPAN12O95859 305 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 CSTAP01040 98 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TMEM35AQ53FP2 167 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 ZNF620Q6ZNG0 422 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 OR1S2Q8NGQ3 325 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 SOCS4Q8WXH5 440 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 NICN1Q9BSH3 213 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TM7SF3Q9NS93 570 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 CSF3P09919 207 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 THBS2P35442 1172 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 SRP9P49458 86 aaKnown RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 PTTG1IPP53801 180 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 PIN1Q13526 163 aaPredicted RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 COL19A1Q14993 1142 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 SLC9A3R2Q15599 337 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 MLIPQ5VWP3 458 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 CNKSR3Q6P9H4 555 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 GPR150Q8NGU9 434 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 FBXW5Q969U6 566 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 NECTIN4Q96NY8 510 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 SLC7A7Q9UM01 511 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 PHIPQ8WWQ0 1821 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 MSCO60682 206 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 PRAMEF11O60813 436 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 FOXA1P55317 472 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 PHYHIPQ92561 330 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TTC9Q92623 222 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 C20orf27Q9GZN8 174 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 DIMT1Q9UNQ2 313 aaKnown RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 C17orf112F2Z3M2 114 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 CNOT4O95628 575 aaKnown RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 ATP1B1P05026 303 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 F3P13726 295 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 EPHA1P21709 976 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 SLC14A1Q13336 389 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 PIP5KL1Q5T9C9 394 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 NBPF12Q5TAG4 269 aaPredicted RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 RPUSD3Q6P087 351 aaKnown RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 VRK3Q8IV63 474 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 OR4K15Q8NH41 348 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 JSRP1Q96MG2 331 aaPredicted RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 LRP6O75581 1613 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 ITGB2P05107 769 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 FAM163BP0C2L3 166 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 SNRPBP14678 240 aaKnown RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 TAS2R38P59533 333 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 ZNF852Q6ZMS4 543 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 CNTN4Q8IWV2 1026 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 CABLES2Q9BTV7 478 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3DA0A087WVF3 549 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3IA0A087WXS9 549 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3EA0A087X179 549 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3KA0A087X1G2 549 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3FA6NER0 549 aaPredicted RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 OTOL1A6NHN0 477 aaPredicted RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3LB9A6J9 549 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 GPRIN2O60269 458 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3HP0C7X1 549 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 PIPP12273 146 aaPredicted RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3GQ6DHY5 549 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3CQ6IPX1 549 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 TBC1D3Q8IZP1 549 aaPredicted RBP12.9□□□□□ -0.34
CHD1-212ENST00000614616 SLC39A9Q9NUM3 307 aa12.9□□□□□ -0.34
CHD1-212ENST00000614616 CR2P20023 1033 aa12.9□□□□□ -0.35
CHD1-212ENST00000614616 C5AR1P21730 350 aa12.9□□□□□ -0.35
CHD1-212ENST00000614616 RHOUQ7L0Q8 258 aa12.9□□□□□ -0.35
CHD1-212ENST00000614616 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.35
CHD1-212ENST00000614616 MBOAT4Q96T53 435 aa12.9□□□□□ -0.35
CHD1-212ENST00000614616 CWH43Q9H720 699 aa12.9□□□□□ -0.35
CHD1-212ENST00000614616 SCN7AQ01118 1682 aa12.9□□□□□ -0.35
CHD1-212ENST00000614616 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
CHD1-212ENST00000614616 APIPQ96GX9 242 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 DOK1Q99704 481 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 AP4M1O00189 453 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 GPR37L1O60883 481 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 EPHA4P54764 986 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 ISL1P61371 349 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 AKR1C1Q04828 323 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 CCNJQ5T5M9 372 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 GGNBP1Q5YKI7 109 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 TIPARPQ7Z3E1 657 aaKnown RBP12.89□□□□□ -0.35
CHD1-212ENST00000614616 CREB3L4Q8TEY5 395 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 C1orf226A1L170 272 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 HTR1FP30939 366 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 CD80P33681 288 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
CHD1-212ENST00000614616 FBXL22Q6P050 247 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 OR1J1Q8NGS3 322 aa12.89□□□□□ -0.35
CHD1-212ENST00000614616 ABHD4Q8TB40 342 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms