RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 YTHDF3Q7Z739 585 aaKnown RBP20.11■□□□□ 0.81
FAM228B-208ENST00000613899 APH1AQ96BI3 265 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 CACYBPQ9HB71 228 aaKnown RBP20.11■□□□□ 0.81
FAM228B-208ENST00000613899 TMEM72A0PK05 275 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 FAM234BA2RU67 622 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 CDHR4A6H8M9 788 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 FAM171A2A8MVW0 826 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 CLOCKO15516 846 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 EIF1BO60739 113 aaKnown RBP20.1■□□□□ 0.81
FAM228B-208ENST00000613899 PAX1P15863 534 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 IGHV1-2P23083 117 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 EDNRAP25101 427 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 OR2B6P58173 313 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 STX1BP61266 288 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 SLC35A1P78382 337 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 MAPK11Q15759 364 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 ZSWIM7Q19AV6 140 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 KRTAP21-3Q3LHN1 58 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 FBXW9Q5XUX1 488 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 EPGNQ6UW88 154 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 OR52P1PQ8NH57 321 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 FBXW5Q969U6 566 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 MUCL1Q96DR8 90 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 DNAJA3Q96EY1 480 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 POM121Q96HA1 1249 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 Q96MF0 132 aa20.1■□□□□ 0.81
FAM228B-208ENST00000613899 POLR3GO15318 223 aaPredicted RBP20.09■□□□□ 0.81
FAM228B-208ENST00000613899 TGDSO95455 350 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 GGT1P19440 569 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 LARS2Q15031 903 aaKnown RBP20.09■□□□□ 0.81
FAM228B-208ENST00000613899 PPA1Q15181 289 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 GTDC1Q4AE62 458 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 TIMM23BQ5SRD1 257 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 RNF220Q5VTB9 566 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 SEZ6L2Q6UXD5 910 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF836Q6ZNA1 936 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 P2RY8Q86VZ1 359 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 UBE2J2Q8N2K1 259 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 LRRC8CQ8TDW0 803 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 SLC38A5Q8WUX1 472 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 VPS33AQ96AX1 596 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 AURKBQ96GD4 344 aaPredicted RBP20.09■□□□□ 0.81
FAM228B-208ENST00000613899 NAA11Q9BSU3 229 aaPredicted RBP20.09■□□□□ 0.81
FAM228B-208ENST00000613899 BDH2Q9BUT1 245 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 RAD21L1Q9H4I0 556 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 TCF7L2Q9NQB0 619 aa20.09■□□□□ 0.81
FAM228B-208ENST00000613899 MRPL33O75394 65 aaKnown RBP20.08■□□□□ 0.81
FAM228B-208ENST00000613899 THBS1P07996 1170 aa20.08■□□□□ 0.81
FAM228B-208ENST00000613899 TFPTP0C1Z6 253 aa20.08■□□□□ 0.81
FAM228B-208ENST00000613899 MRPL19P49406 292 aaKnown RBP20.08■□□□□ 0.81
FAM228B-208ENST00000613899 H3F3AP84243 136 aa20.08■□□□□ 0.81
FAM228B-208ENST00000613899 VRK2Q86Y07 508 aa20.08■□□□□ 0.81
FAM228B-208ENST00000613899 TMEM19Q96HH6 336 aa20.08■□□□□ 0.81
FAM228B-208ENST00000613899 COX4I2Q96KJ9 171 aa20.08■□□□□ 0.81
FAM228B-208ENST00000613899 ADAM19Q9H013 955 aa20.08■□□□□ 0.81
FAM228B-208ENST00000613899 ARMC7Q9H6L4 198 aa20.08■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF701Q9NV72 531 aaPredicted RBP20.08■□□□□ 0.81
FAM228B-208ENST00000613899 RLIMQ9NVW2 624 aa20.08■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF443Q9Y2A4 671 aaPredicted RBP20.08■□□□□ 0.81
FAM228B-208ENST00000613899 NIPBLQ6KC79 2804 aaeCLIP20.07■□□□□ 0.8
FAM228B-208ENST00000613899 PGM3O95394 542 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 CXCR1P25024 350 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 COPZ1P61923 177 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 RPS4XP62701 263 aaKnown RBP20.07■□□□□ 0.8
FAM228B-208ENST00000613899 BSPH1Q075Z2 132 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 FADDQ13158 208 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 CCDC103Q8IW40 242 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 ZNF433Q8N7K0 673 aaPredicted RBP20.07■□□□□ 0.8
FAM228B-208ENST00000613899 GTF2H4Q92759 462 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 ASB6Q9NWX5 421 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 MALT1Q9UDY8 824 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 ZNF232Q9UNY5 417 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 SLC9A8Q9Y2E8 581 aa20.07■□□□□ 0.8
FAM228B-208ENST00000613899 USF3Q68DE3 2245 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 A0A0G2JPF8 293 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 OR5H1A6NKK0 313 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 HNRNPCL2B2RXH8 293 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 HNRNPCL3B7ZW38 293 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 H7C1Q1 480 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 HNRNPCL1O60812 293 aaKnown RBP20.06■□□□□ 0.8
FAM228B-208ENST00000613899 RAMP1O60894 148 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 IGHV3-9P01782 118 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 GKN3PP0CG01 181 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 HNRNPCL4P0DMR1 293 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 IMPDH2P12268 514 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 IDUAP35475 653 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 ZNF672Q499Z4 452 aaPredicted RBP20.06■□□□□ 0.8
FAM228B-208ENST00000613899 RPS26P11Q5JNZ5 115 aaPredicted RBP20.06■□□□□ 0.8
FAM228B-208ENST00000613899 PRAMEF8Q5VWM4 474 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 PRAMEF7Q5VXH5 474 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 WBP2NLQ6ICG8 309 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 PAQR6Q6TCH4 344 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 CLEC9AQ6UXN8 241 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 CASP12Q6UXS9 341 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 GOLGA6L1Q8N7Z2 621 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 ATP6V1G3Q96LB4 118 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 SMR3AQ99954 134 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 PAIP1Q9H074 479 aaKnown RBP20.06■□□□□ 0.8
FAM228B-208ENST00000613899 TAS2R16Q9NYV7 291 aa20.06■□□□□ 0.8
FAM228B-208ENST00000613899 LAMP3Q9UQV4 416 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms