RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 LINC00615Q96LM1 132 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 LRRC3BQ96PB8 259 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 SEC22CQ9BRL7 303 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 PRDM7Q9NQW5 492 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 MRTO4Q9UKD2 239 aaKnown RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 MKL2Q9ULH7 1088 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 MN1Q10571 1320 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 E9PI62 339 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 FGF17O60258 216 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SELENOFO60613 162 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 PPM1BO75688 479 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 APOC3P02656 99 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TRAPPC2P0DI81 140 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TRAPPC2BP0DI82 140 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 HLA-DMAP28067 261 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 AQP2P41181 271 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 HHEXQ03014 270 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TOMM20Q15388 145 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 DUSP6Q16828 381 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TMEM201Q5SNT2 666 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 PRAMEF17Q5VTA0 474 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 KCTD9Q7L273 389 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TMPRSS9Q7Z410 1059 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SPRED2Q7Z698 418 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 UBE3DQ7Z6J8 389 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 BOLLQ8N9W6 283 aaKnown RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC6A18Q96N87 628 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 CMKLR1Q99788 373 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 DPYSL5Q9BPU6 564 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 HDAC8Q9BY41 377 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 NOX3Q9HBY0 568 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 FBXO34Q9NWN3 711 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 FBXL21Q9UKT6 434 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 CBLCQ9ULV8 474 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 CYP8B1Q9UNU6 501 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 V9GY05 133 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 DNAH12Q6ZR08 3092 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 C13orf42A0A1B0GVH6 325 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 DCDC2BA2VCK2 349 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 AK1P00568 194 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 GIMD1P0DJR0 217 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 PTHLHP12272 177 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 NID1P14543 1247 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 MAPK3P27361 379 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 NRG3P56975 720 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 DUSP2Q05923 314 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 GPR18Q14330 331 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 GALEQ14376 348 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 ALG10Q5BKT4 473 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF770Q6IQ21 691 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 Q6ZSR6 202 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TPRA1Q86W33 373 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 RDH10Q8IZV5 341 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SDR16C5Q8N3Y7 309 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TP53I13Q8NBR0 393 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 DIO2Q92813 273 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 ASB16Q96NS5 453 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 WDFY2Q96P53 400 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TGM7Q96PF1 710 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TSSK2Q96PF2 358 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 OR2M2Q96R28 347 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 G6PC3Q9BUM1 346 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SFXN1Q9H9B4 322 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SEC61A2Q9H9S3 476 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 B3GAT2Q9NPZ5 323 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 PRDM9Q9NQV7 894 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 ACOXLQ9NUZ1 547 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 THAP10Q9P2Z0 257 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 FAM186AA6NE01 2351 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 BRWD1Q9NSI6 2320 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TCRBV21S2A2A0A5A6 115 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 OTOL1A6NHN0 477 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 RHPN2P1A8MT19 583 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 TNFRSF10AO00220 468 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 NARSO43776 548 aaKnown RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 CDC40O60508 579 aaKnown RBP eCLIP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 RP2O75695 350 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 UBL3O95164 117 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SPDEFO95238 335 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SIX6O95475 246 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 ECDO95905 644 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 CISD3P0C7P0 127 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 MAGEB1P43366 347 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 GRM7Q14831 915 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 KIR2DS3Q14952 304 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 MLF2Q15773 248 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SMAD2Q15796 467 aaKnown RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 NKPD1Q17RQ9 610 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 ULK3Q6PHR2 472 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 KLHL24Q6TFL4 600 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 ALKAL2Q6UX46 152 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC35D2Q76EJ3 337 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 FOXRED2Q8IWF2 684 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 DNAAF1Q8NEP3 725 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 KCTD12Q96CX2 325 aaKnown RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 Q96M85 177 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 DERL3Q96Q80 235 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 S100A13Q99584 98 aa6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 ELF4Q99607 663 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-206ENST00000610556 CD93Q9NPY3 652 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms