RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF264O43296 627 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 DOK2O60496 412 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 NFATC1O95644 943 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 F11P03951 625 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 IL11P20809 199 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 GABRR2P28476 465 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 GNRHRP30968 328 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 SREBF1P36956 1147 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 GRK6P43250 576 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 CSRP3P50461 194 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 TAS2R38P59533 333 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 IRF8Q02556 426 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF345Q14585 488 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 UNC50Q53HI1 259 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 OR10K2Q6IF99 312 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 LBX2Q6XYB7 198 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF836Q6ZNA1 936 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ASB18Q6ZVZ8 466 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 NUFIP2Q7Z417 695 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 SLC30A8Q8IWU4 369 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 MIER2Q8N344 545 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 MYCT1Q8N699 235 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 FAM98AQ8NCA5 519 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 OR5M8Q8NGP6 311 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZCCHC10Q8TBK6 192 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 STYXQ8WUJ0 223 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 DCAF4Q8WV16 495 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 TSEN15Q8WW01 171 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 PSMG2Q969U7 264 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 MRGPRFQ96AM1 343 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ACCSQ96QU6 501 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 RUSC1Q9BVN2 902 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ACTR8Q9H981 624 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 EML4Q9HC35 981 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 EXOSC4Q9NPD3 245 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 RNF19AQ9NV58 838 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 TBC1D29Q9UFV1 150 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 NDOR1Q9UHB4 597 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 PADI1Q9ULC6 663 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 PPT2Q9UMR5 302 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 UBQLN1Q9UMX0 589 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 PRG3Q9Y2Y8 225 aaPredicted RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF646O15015 1829 aaPredicted RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 WDR81Q562E7 1941 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 KAT6AQ92794 2004 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 A0A1W2PQ45 241 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 A0A1W2PQY0 241 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 A6NNC1 897 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 CLIC2O15247 247 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 CDRT1O95170 752 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 ALPIP09923 528 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 GZMBP10144 247 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 CD79AP11912 226 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 TDGF1P13385 188 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 SLC2A5P22732 501 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 CTSOP43234 321 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 STK19P49842 368 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 LUMP51884 338 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 OR10A3P58181 314 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 MC1RQ01726 317 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 HERPUD1Q15011 391 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 TAF9Q16594 264 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 SMIM21Q3B7S5 101 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 BEX5Q5H9J7 111 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 OR6B2Q6IFH4 312 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 MON1BQ7L1V2 547 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 OR2W3Q7Z3T1 314 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 GOLGA7Q7Z5G4 137 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 FSTL5Q8N475 847 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 JAGN1Q8N5M9 183 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 RELL2Q8NC24 303 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 OR52B6Q8NGF0 335 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 FBXO32Q969P5 355 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 BPIFA2Q96DR5 249 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 EPYCQ99645 322 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 CMKLR1Q99788 373 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 SLC12A9Q9BXP2 914 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF408Q9H9D4 720 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 PLEKHA2Q9HB19 425 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 NOX3Q9HBY0 568 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 FZD3Q9NPG1 666 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM100Q9NV29 134 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 IL17CQ9P0M4 197 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 TSPAN16Q9UKR8 245 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 SPIN1Q9Y657 262 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 GABRR3A8MPY1 467 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 MFNGO00587 321 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 DFFBO76075 338 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 B3GAT3O94766 335 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 SCELO95171 688 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 APOC2P02655 101 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF37AP17032 561 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 ITGB5P18084 799 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 AGTR1P30556 359 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 COMPP49747 757 aaPredicted RBP8.22□□□□□ -1.09
COMMD3-215ENST00000602574 NDUFA6P56556 154 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 MESP2Q0VG99 397 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 PJVKQ0ZLH3 352 aa8.22□□□□□ -1.09
COMMD3-215ENST00000602574 UBE2V1Q13404 147 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms