RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 TTKP33981 857 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 MAGEA8P43361 318 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 SLC1A6P48664 564 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 NUDT6P53370 316 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 CLNS1AP54105 237 aaKnown RBP11.57□□□□□ -0.56
RPS28-204ENST00000602140 H3F3AP84243 136 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 GABRA6Q16445 453 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 SYPL1Q16563 259 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 DPY19L1Q2PZI1 675 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 KRT71Q3SY84 523 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 FAM174BQ3ZCQ3 159 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 C9orf135Q5VTT2 229 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 C11orf71Q6IPW1 123 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 HMBOX1Q6NT76 420 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 CASP12Q6UXS9 341 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 FBXL14Q8N1E6 418 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 OR52E4Q8NGH9 312 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 ADAD1Q96M93 576 aaKnown RBP11.57□□□□□ -0.56
RPS28-204ENST00000602140 MUS81Q96NY9 551 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 SORT1Q99523 831 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 DHRS9Q9BPW9 319 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 C1QTNF6Q9BXI9 259 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 NUF2Q9BZD4 464 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 CBLN4Q9NTU7 201 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 MALT1Q9UDY8 824 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 TRAPPC4Q9Y296 219 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.57□□□□□ -0.56
RPS28-204ENST00000602140 TMED7Q9Y3B3 224 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 GPRIN2O60269 458 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 ITGA5P08648 1049 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 HTR3AP46098 478 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 FABP6P51161 128 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 POLR2HP52434 150 aaKnown RBP11.56□□□□□ -0.56
RPS28-204ENST00000602140 NME5P56597 212 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 OR7E24Q6IFN5 339 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 B3GLCTQ6Y288 498 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 RNF130Q86XS8 419 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 HIPK1Q86Z02 1210 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 CMIPQ8IY22 773 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 DEPDC4Q8N2C3 294 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 MUC15Q8N387 334 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 ANKFN1Q8N957 763 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 HTRA1Q92743 480 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 DDIT4LQ96D03 193 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 TEX37Q96LM6 180 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 CCDC115Q96NT0 180 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 TRNT1Q96Q11 434 aaKnown RBP11.56□□□□□ -0.56
RPS28-204ENST00000602140 SLC38A1Q9H2H9 487 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 UPB1Q9UBR1 384 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 BTNL2Q9UIR0 455 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 OSGIN1Q9UJX0 560 aa11.56□□□□□ -0.56
RPS28-204ENST00000602140 MXRA5Q9NR99 2828 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 ABCA1O95477 2261 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 TMEM72A0PK05 275 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 FAM234BA2RU67 622 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 CCDC154A6NI56 674 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 AGAP5A6NIR3 686 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 A8MV72 311 aaPredicted RBP11.55□□□□□ -0.56
RPS28-204ENST00000602140 PDLIM1O00151 329 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 RGS16O15492 202 aaPredicted RBP11.55□□□□□ -0.56
RPS28-204ENST00000602140 ZNF208O43345 1280 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 EIF1BO60739 113 aaKnown RBP11.55□□□□□ -0.56
RPS28-204ENST00000602140 SNUPNO95149 360 aaKnown RBP11.55□□□□□ -0.56
RPS28-204ENST00000602140 CHRM4P08173 479 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 IMPDH2P12268 514 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 BGNP21810 368 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 TACR3P29371 465 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 UFM1P61960 85 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 SLC35A1P78382 337 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 RAB35Q15286 201 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 CLEC2AQ6UVW9 174 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 LRRC74BQ6ZQY2 392 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 LRRC34Q8IZ02 419 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 WDR31Q8NA23 367 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 OR10H5Q8NGA6 315 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 WDR60Q8WVS4 1066 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 PMM1Q92871 262 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 PANX1Q96RD7 426 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 NAA11Q9BSU3 229 aaPredicted RBP11.55□□□□□ -0.56
RPS28-204ENST00000602140 INPP5KQ9BT40 448 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 MEAF6Q9HAF1 191 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 SLC7A10Q9NS82 523 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 PNPOQ9NVS9 261 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 PARPBPQ9NWS1 579 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 HAO1Q9UJM8 370 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 SLC9A8Q9Y2E8 581 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 FLVCR1Q9Y5Y0 555 aa11.55□□□□□ -0.56
RPS28-204ENST00000602140 A0A096LNT2 108 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 ZC3H12DA2A288 527 aaKnown RBP11.54□□□□□ -0.56
RPS28-204ENST00000602140 TM9SF1O15321 606 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 IFNA2P01563 188 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 GSNP06396 782 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 ALDOCP09972 364 aaKnown RBP11.54□□□□□ -0.56
RPS28-204ENST00000602140 IL7RP16871 459 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 CDKN2CP42773 168 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 SLC1A3P43003 542 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 ANXA11P50995 505 aaKnown RBP11.54□□□□□ -0.56
RPS28-204ENST00000602140 DSCR9P59020 149 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 STX3Q13277 289 aa11.54□□□□□ -0.56
RPS28-204ENST00000602140 MPP2Q14168 576 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms