RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	STAR	P49675	285 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	RIPK1	Q13546	671 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	DGCR6	Q14129	220 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	C3AR1	Q16581	482 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	POMZP3	Q6PJE2	187 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	OR52J3	Q8NH60	311 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	EPYC	Q99645	322 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	TIMP4	Q99727	224 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	PKP2	Q99959	881 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	C6orf203	Q9P0P8	240 aa	Predicted RBP	19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	OSGIN2	Q9Y236	505 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	ZNF337	Q9Y3M9	751 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	LYVE1	Q9Y5Y7	322 aa		19.79	■□□□□ 0.76
LTBP4-227	ENST00000600026	MYO18B	Q8IUG5	2567 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026		A0A087WUJ7	227 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026		H3BML4	177 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	LINC01387	J3KSC0	135 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	LYPD3	O95274	346 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	NTN1	O95631	604 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	ELK4	P28324	431 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	DNAJA1	P31689	397 aa	Known RBP	19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	LHX2	P50458	406 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	MAP2K6	P52564	334 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	ARHGDIA	P52565	204 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	EIF2S3L	Q2VIR3	472 aa	Known RBP	19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	WLS	Q5T9L3	541 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	TTC33	Q6PID6	262 aa	Predicted RBP	19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	RRM2B	Q7LG56	351 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	LILRA2	Q8N149	483 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	PNPLA3	Q9NST1	481 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	MAN2C1	Q9NTJ4	1040 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	STX18	Q9P2W9	335 aa	Known RBP	19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	ESPL1	Q14674	2120 aa		19.78	■□□□□ 0.76
LTBP4-227	ENST00000600026	MPDZ	O75970	2070 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	PRRG2	O14669	202 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	CCNA2	P20248	432 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	POU3F2	P20265	443 aa	Predicted RBP	19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	FPR1	P21462	350 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	FKBP2	P26885	142 aa	Known RBP	19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	RBM34	P42696	430 aa	Known RBP	19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	HMGA2	P52926	109 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	SELENBP1	Q13228	472 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	EXOC3L2	Q2M3D2	409 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	EMC4	Q5J8M3	183 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	HMBOX1	Q6NT76	420 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	ADGRG3	Q86Y34	549 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	NKAIN4	Q8IVV8	208 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	OR5M9	Q8NGP3	310 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	ACOT11	Q8WXI4	607 aa	Predicted RBP	19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	WDYHV1	Q96HA8	205 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	ALPK1	Q96QP1	1244 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	PRSS27	Q9BQR3	290 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	PRDM14	Q9GZV8	571 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	SEMA6A	Q9H2E6	1030 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	VNN3	Q9NY84	501 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	STOML1	Q9UBI4	398 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	CHRNA9	Q9UGM1	479 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	SH3BGRL2	Q9UJC5	107 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	TINAG	Q9UJW2	476 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026		U3KQV3	271 aa		19.77	■□□□□ 0.76
LTBP4-227	ENST00000600026	NBAS	A2RRP1	2371 aa		19.77	■□□□□ 0.75
LTBP4-227	ENST00000600026	TRGV8	A0A0C4DH27	118 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	STS	P08842	583 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	PEPD	P12955	493 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	IL11	P20809	199 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	CLDN18	P56856	261 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	GXYLT1	Q4G148	440 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	C1QL3	Q5VWW1	255 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	C3orf33	Q6P1S2	294 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	LINC00114	Q6XXX2	140 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	ZNF730	Q6ZMV8	503 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	LINC00471	Q8N535	108 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	OR5K1	Q8NHB7	308 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	PRR7	Q8TB68	274 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	SLC7A13	Q8TCU3	470 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	SLC25A43	Q8WUT9	341 aa	Predicted RBP	19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	TMEM239	Q8WW34	195 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	SMPDL3B	Q92485	455 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	TMEM43	Q9BTV4	400 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	RNPEPL1	Q9HAU8	725 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	NTN4	Q9HB63	628 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	KRCC1	Q9NPI7	259 aa	Predicted RBP	19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	CAMK2A	Q9UQM7	478 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	AP4B1	Q9Y6B7	739 aa		19.76	■□□□□ 0.75
LTBP4-227	ENST00000600026	TRBV4-1	A0A0J9YWV2	114 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	TMEM72	A0PK05	275 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	ZNF208	O43345	1280 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	CCNB2	O95067	398 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	ATP6V1G2	O95670	118 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	ZNF708	P17019	499 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	ZNF23	P17027	643 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	CA7	P43166	264 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	PPP1R8	Q12972	351 aa	Known RBP	19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	ZNF585A	Q6P3V2	769 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	PODNL1	Q6PEZ8	512 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	C5orf46	Q6UWT4	87 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	DOLPP1	Q86YN1	238 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	LURAP1L	Q8IV03	231 aa		19.75	■□□□□ 0.75
LTBP4-227	ENST00000600026	PM20D2	Q8IYS1	436 aa		19.75	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms