RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 C16orf62Q7Z3J2 963 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 ZNF100Q8IYN0 542 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 NATD1Q8N6N6 113 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 OR4A15Q8NGL6 344 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 OR52N5Q8NH56 324 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 MIPOL1Q8TD10 442 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 ZG16BQ96DA0 208 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 HS6ST2Q96MM7 605 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 PRPF18Q99633 342 aaKnown RBP12.92□□□□□ -0.34
IRF3-223ENST00000599223 USB1Q9BQ65 265 aaKnown RBP12.92□□□□□ -0.34
IRF3-223ENST00000599223 CACNG6Q9BXT2 260 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 ALG2Q9H553 416 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 CTPS2Q9NRF8 586 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 NOP53Q9NZM5 478 aaKnown RBP12.92□□□□□ -0.34
IRF3-223ENST00000599223 DCTN4Q9UJW0 460 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 RAP2CQ9Y3L5 183 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 SLC25A15Q9Y619 301 aa12.92□□□□□ -0.34
IRF3-223ENST00000599223 RNASET2O00584 256 aaKnown RBP12.91□□□□□ -0.34
IRF3-223ENST00000599223 AP3D1O14617 1153 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 SSX4O60224 188 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 AK1P00568 194 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 ITGA5P08648 1049 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 OR12D1P0DN82 309 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 KITP10721 976 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 PGCP20142 388 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 RYKP34925 604 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 ZNF83P51522 516 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 SLC25A3Q00325 362 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 EMX2Q04743 252 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 FBXW9Q5XUX1 488 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 BHLHB9Q6PI77 547 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 EIF3MQ7L2H7 374 aaKnown RBP12.91□□□□□ -0.34
IRF3-223ENST00000599223 MTDHQ86UE4 582 aaKnown RBP12.91□□□□□ -0.34
IRF3-223ENST00000599223 CCDC103Q8IW40 242 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 PIAS4Q8N2W9 510 aaPredicted RBP12.91□□□□□ -0.34
IRF3-223ENST00000599223 ZNF781Q8N8C0 355 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 SLC25A43Q8WUT9 341 aaPredicted RBP12.91□□□□□ -0.34
IRF3-223ENST00000599223 TMEM234Q8WY98 164 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 APH1AQ96BI3 265 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 MUCL1Q96DR8 90 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 THOC1Q96FV9 657 aaKnown RBP12.91□□□□□ -0.34
IRF3-223ENST00000599223 GRIP2Q9C0E4 1043 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 YAE1D1Q9NRH1 226 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 MALT1Q9UDY8 824 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 CHRNA9Q9UGM1 479 aa12.91□□□□□ -0.34
IRF3-223ENST00000599223 MALRD1Q5VYJ5 2156 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 ANKRD28O15084 1053 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 TLX2O43763 284 aaPredicted RBP12.9□□□□□ -0.34
IRF3-223ENST00000599223 TP53P04637 393 aaPredicted RBP12.9□□□□□ -0.34
IRF3-223ENST00000599223 TFPIP10646 304 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 RPL14P50914 215 aaKnown RBP12.9□□□□□ -0.34
IRF3-223ENST00000599223 CSNK2A1P68400 391 aaPredicted RBP12.9□□□□□ -0.34
IRF3-223ENST00000599223 CHRNEQ04844 493 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 PDK3Q15120 406 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 SAXO2Q658L1 398 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 CGB2Q6NT52 195 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 HOMEZQ8IX15 550 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 PHC2Q8IXK0 858 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 UBE2J2Q8N2K1 259 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 OR8J2Q8NGG1 315 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 OR52E4Q8NGH9 312 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 ROPN1LQ96C74 230 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 LRRC37BQ96QE4 947 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 TMEM120AQ9BXJ8 343 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 C20orf27Q9GZN8 174 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 AKTIPQ9H8T0 292 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 SERINC1Q9NRX5 453 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 FAIMQ9NVQ4 179 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 EMC3Q9P0I2 261 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 MARCOQ9UEW3 520 aaPredicted RBP12.9□□□□□ -0.34
IRF3-223ENST00000599223 NOSIPQ9Y314 301 aaKnown RBP12.9□□□□□ -0.34
IRF3-223ENST00000599223 WDR45Q9Y484 360 aa12.9□□□□□ -0.34
IRF3-223ENST00000599223 DUXAA6NLW8 204 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 CCT8L1PA6NM43 557 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 PDLIM1O00151 329 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 PMS2P2O95744 297 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 CCNA2P20248 432 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 CD40P25942 277 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 TTKP33981 857 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 NUDT6P53370 316 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 SLC16A1P53985 500 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 AQP5P55064 265 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 SPANXN4Q5MJ08 99 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 C6orf52Q5T4I8 152 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 C9orf135Q5VTT2 229 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 AGAP6Q5VW22 663 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 HMBOX1Q6NT76 420 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 TRPM8Q7Z2W7 1104 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 GRINAQ7Z429 371 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 P2RY8Q86VZ1 359 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 ADGRG3Q86Y34 549 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 HIPK1Q86Z02 1210 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 ZNF525Q8N782 197 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 OR10H5Q8NGA6 315 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 C10orf82Q8WW14 230 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 XAGE5Q8WWM1 108 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 CNOT9Q92600 299 aaKnown RBP12.89□□□□□ -0.35
IRF3-223ENST00000599223 SAP130Q9H0E3 1048 aa12.89□□□□□ -0.35
IRF3-223ENST00000599223 BARX1Q9HBU1 254 aaPredicted RBP12.89□□□□□ -0.35
IRF3-223ENST00000599223 EXD2Q9NVH0 621 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms