RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 PEPDP12955 493 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 LCN1P31025 176 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 IDUAP35475 653 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 CRYBB2P43320 205 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 SERPINB10P48595 397 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 CRMP1Q14194 572 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 TOMM34Q15785 309 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 ELOA3BQ3SY89 546 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 FAM69BQ5VUD6 431 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 PIP4P1Q86T03 277 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 GID4Q8IVV7 300 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 C17orf47Q8NEP4 570 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 ELOA3Q8NG57 546 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 OR51G2Q8NGK0 314 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 OR6Q1Q8NGQ2 317 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 BORCS5Q969J3 196 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 SPSB2Q99619 263 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 WDR77Q9BQA1 342 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 SPIN1Q9Y657 262 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 DMXL1Q9Y485 3027 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 CCDC182A6NF36 153 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 RIIAD1A6NNX1 92 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 PRR23D1E9PI22 279 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 LRRTM2O43300 516 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 OR7A10O76100 309 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 WISP1O95388 367 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 PRR23D2P0DMB1 279 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 ZNF28P17035 718 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 PNLIPRP2P54317 469 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 EMP2P54851 167 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 TIMM50Q3ZCQ8 353 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 KLHL12Q53G59 568 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 BTLAQ7Z6A9 289 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 KBTBD8Q8NFY9 601 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 THAP3Q8WTV1 239 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 ERMAPQ96PL5 475 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 SECISBP2Q96T21 854 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 AKIP1Q9NQ31 210 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 TNFRSF10DQ9UBN6 386 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 CHRNA9Q9UGM1 479 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 BAIAP2Q9UQB8 552 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 WDFY3Q8IZQ1 3526 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 PNMA8CA0A1B0GUJ8 204 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 MEN1O00255 615 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 NDUFB5O43674 189 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 PPM1BO75688 479 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 NDUFB2O95178 105 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 LALBAP00709 142 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 PNMTP11086 282 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 FGF5P12034 268 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 CPEP16870 476 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 ATP6V1E1P36543 226 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 DUSP3P51452 185 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 EGR4Q05215 589 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 BMPERQ8N8U9 685 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 C8orf44Q96CB5 159 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 DACH2Q96NX9 599 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 DEPDC7Q96QD5 511 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 CDC6Q99741 560 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 TBL1XR1Q9BZK7 514 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 SLC19A3Q9BZV2 496 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 OR51V1Q9H2C8 321 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 EXOSC4Q9NPD3 245 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 ERVK13-1Q9NX77 482 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 ADAM18Q9Y3Q7 739 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 CFAP54Q96N23 3096 aa15.54■□□□□ 0.08
SHKBP1-216ENST00000598201 A0A1W2PQD3 144 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 METTL15A6NJ78 407 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 TM4SF5O14894 197 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 FADS1O60427 444 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 CCL4P13236 92 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 HK1P19367 917 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 SLC2A5P22732 501 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 TACR3P29371 465 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 ZFP36L1Q07352 338 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 ZNF791Q3KP31 576 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 PAPD4Q6PIY7 484 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 TMEM99Q8N816 258 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 MCFD2Q8NI22 146 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 ZNF563Q8TA94 476 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 METTL21AQ8WXB1 218 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 PMEPA1Q969W9 287 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 MOGAT1Q96PD6 335 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 TEAD3Q99594 435 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 ARHGAP9Q9BRR9 750 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 CDADC1Q9BWV3 514 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 ADAM19Q9H013 955 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 FBXO8Q9NRD0 319 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 SEC14L4Q9UDX3 406 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 CDV3Q9UKY7 258 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 YARS2Q9Y2Z4 477 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 ZNF337Q9Y3M9 751 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 IER3IP1Q9Y5U9 82 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 MPDZO75970 2070 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 ADAM10O14672 748 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 SLC30A4O14863 429 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 SCO2O43819 266 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 GYPBP06028 91 aa15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 HIST1H1CP16403 213 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-216ENST00000598201 PSMA1P25786 263 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms