RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 LOC100130705A0A1B0GUX0 176 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 ZAR1LA6NP61 321 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 A8MVM7 634 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 SHISA8B8ZZ34 492 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 SUSD5O60279 629 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 ZIC3O60481 467 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 FZD7O75084 574 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 PTP4A3O75365 173 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 IGFBP1P08833 259 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 GNAO1P09471 354 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 CD46P15529 392 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 HK1P19367 917 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 IL11P20809 199 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 MYF6P23409 242 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 CHMP24386 653 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 MAP2K6P52564 334 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 GPR85P60893 370 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 FOXK1P85037 733 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 LTBQ06643 244 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 KEAP1Q14145 624 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 HYAL4Q2M3T9 481 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 BROXQ5VW32 411 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 C5orf46Q6UWT4 87 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF620Q6ZNG0 422 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 CDK20Q8IZL9 346 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF555Q8NEP9 628 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 OR6S1Q8NH40 331 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 KTI12Q96EK9 354 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 HRASLS5Q96KN8 279 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 C5orf34Q96MH7 638 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 PTDSS2Q9BVG9 487 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 OR2B2Q9GZK3 357 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 CHRNA9Q9UGM1 479 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 BOKQ9UMX3 212 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 RAXQ9Y2V3 346 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 CDH10Q9Y6N8 788 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 ZFHX4Q86UP3 3567 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 TRAV36DV7A0A075B6V5 113 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 ZC3H12DA2A288 527 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 EFCAB9A8MZ26 197 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 BCKDKO14874 412 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 OR7A10O76100 309 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 GLSO94925 669 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 CLIC3O95833 236 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 BGLAPP02818 100 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 RFPL3SP0C7P2 107 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF17P17021 662 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 FUT1P19526 365 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 CCNA2P20248 432 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 GGT2P36268 569 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 SLC9A3P48764 834 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 RPS6KA3P51812 740 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 UCNP55089 124 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 FXYD6P3P58550 94 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 B3GALT5-AS1P59052 145 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 IL18R1Q13478 541 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 MED21Q13503 144 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF74Q16587 644 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF766Q5HY98 468 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF691Q5VV52 312 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 C1orf140Q5VVS0 124 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 C1QL3Q5VWW1 255 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 IGFL3Q6UXB1 125 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 Q6ZPB1 254 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 GALNTL5Q7Z4T8 443 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 OR8D4Q8NGM9 314 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 SNRNP27Q8WVK2 155 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 TAAR8Q969N4 342 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 JSRP1Q96MG2 331 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF570Q96NI8 536 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 DCBLD2Q96PD2 775 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 POTEKPQ9BYX7 375 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 PLA2G12AQ9BZM1 189 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 SLC25A19Q9HC21 320 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 IL20Q9NYY1 176 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 UBAP1Q9NZ09 502 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 DKKL1Q9UK85 242 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 SIGLEC7Q9Y286 467 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 CSAG2Q9Y5P2 127 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 TPRP12270 2363 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 CELSR3Q9NYQ7 3312 aa13.32□□□□□ -0.28
SHKBP1-211ENST00000595945 OR2M5A3KFT3 312 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 LRRN3E7EW58 273 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 KLRC4-KLRK1H3BQV0 150 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 TAF4O00268 1085 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 SOX14O95416 240 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 CH25HO95992 272 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 TSPAN19P0C672 248 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 ELK4P28324 431 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 MEOX1P50221 254 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 RPS4XP62701 263 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 CDK5Q00535 292 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 PTGES3Q15185 160 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 SLX4IPQ5VYV7 408 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 C12orf73Q69YU5 71 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 POMZP3Q6PJE2 187 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 LRRC69Q6ZNQ3 347 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 CCDC71Q8IV32 467 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 ZFP62Q8NB50 900 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 TMEM178AQ8NBL3 297 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1017.6 ms