RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 LRIF1Q5T3J3 769 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 RNF220Q5VTB9 566 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 ZNF704Q6ZNC4 412 aaPredicted RBP12.29□□□□□ -0.44
APOC1-208ENST00000592535 Q6ZT83 130 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 BHLHA15Q7RTS1 189 aaPredicted RBP12.29□□□□□ -0.44
APOC1-208ENST00000592535 KRTAP1-3Q8IUG1 177 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 CCDC103Q8IW40 242 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 ZNF100Q8IYN0 542 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 WFDC11Q8NEX6 87 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 CKAP2Q8WWK9 683 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 KISS1RQ969F8 398 aaPredicted RBP12.29□□□□□ -0.44
APOC1-208ENST00000592535 DDIT4LQ96D03 193 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 SPDL1Q96EA4 605 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 THOC1Q96FV9 657 aaKnown RBP12.29□□□□□ -0.44
APOC1-208ENST00000592535 ADAM19Q9H013 955 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 RAD21L1Q9H4I0 556 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 A4GALTQ9NPC4 353 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 THUMPD1Q9NXG2 353 aaKnown RBP12.29□□□□□ -0.44
APOC1-208ENST00000592535 EMC3Q9P0I2 261 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 TMEM181Q9P2C4 612 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 TRAPPC4Q9Y296 219 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 ROS1P08922 2347 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 DNPH1O43598 174 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 LYZL6O75951 148 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 FPR1P21462 350 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 IGHV1-2P23083 117 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 HOXC12P31275 282 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 ATP4BP51164 291 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 NR1H2P55055 460 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 FADDQ13158 208 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 LARS2Q15031 903 aaKnown RBP12.28□□□□□ -0.44
APOC1-208ENST00000592535 AGKQ53H12 422 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 C10orf111Q8N326 155 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 CADM2Q8N3J6 435 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 PIGXQ8TBF5 258 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 PIGTQ969N2 578 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 MAGEB18Q96M61 343 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 CCL19Q99731 98 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 PIP5K1AQ99755 562 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 TMEM204Q9BSN7 226 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 SPATA9Q9BWV2 254 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 BCL2L10Q9HD36 194 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 VAPAQ9P0L0 249 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 NOSIPQ9Y314 301 aaKnown RBP12.28□□□□□ -0.44
APOC1-208ENST00000592535 ARID1AO14497 2285 aa12.28□□□□□ -0.44
APOC1-208ENST00000592535 SMPD2O60906 423 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 IGHV3-9P01782 118 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 COX5AP20674 150 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 CXCR1P25024 350 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 NTF4P34130 210 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 SLC16A1P53985 500 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 SLC35A1P78382 337 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 NKX6-1P78426 367 aaPredicted RBP12.27□□□□□ -0.45
APOC1-208ENST00000592535 H3F3AP84243 136 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 SQLEQ14534 574 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 ZSWIM7Q19AV6 140 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 ZNF311Q5JNZ3 666 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 PRAMEF8Q5VWM4 474 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 PRAMEF7Q5VXH5 474 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 WBP2NLQ6ICG8 309 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 SEZ6L2Q6UXD5 910 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 C20orf204Q6ZNR8 217 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 ATG4DQ86TL0 474 aaPredicted RBP12.27□□□□□ -0.45
APOC1-208ENST00000592535 SERPINA11Q86U17 422 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 BBS10Q8TAM1 723 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 HSD17B8Q92506 261 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 POTEKPQ9BYX7 375 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 CACYBPQ9HB71 228 aaKnown RBP12.27□□□□□ -0.45
APOC1-208ENST00000592535 DLL4Q9NR61 685 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 ZNF232Q9UNY5 417 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 IFT52Q9Y366 437 aa12.27□□□□□ -0.45
APOC1-208ENST00000592535 ACANP16112 2415 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 TRBV5-3A0A0A0MS03 114 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 C5orf58C9J3I9 102 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 GPR171O14626 319 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 FRS3O43559 492 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 EIF1BO60739 113 aaKnown RBP12.26□□□□□ -0.45
APOC1-208ENST00000592535 PGM3O95394 542 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 CNOT4O95628 575 aaKnown RBP12.26□□□□□ -0.45
APOC1-208ENST00000592535 ARAFP10398 606 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 NCF2P19878 526 aaPredicted RBP12.26□□□□□ -0.45
APOC1-208ENST00000592535 ADSLP30566 484 aaPredicted RBP12.26□□□□□ -0.45
APOC1-208ENST00000592535 IDUAP35475 653 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 MAP2K6P52564 334 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 RIPPLY3P57055 190 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 COPZ1P61923 177 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 IRX1P78414 480 aaPredicted RBP12.26□□□□□ -0.45
APOC1-208ENST00000592535 BNIP2Q12982 314 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 CAPRIN1Q14444 709 aaKnown RBP12.26□□□□□ -0.45
APOC1-208ENST00000592535 STK11Q15831 433 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 GCNT6Q5T4J0 391 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 FBXW9Q5XUX1 488 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 UBE2J2Q8N2K1 259 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 NFKBIDQ8NI38 313 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 APH1AQ96BI3 265 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 NAA11Q9BSU3 229 aaPredicted RBP12.26□□□□□ -0.45
APOC1-208ENST00000592535 RSPO3Q9BXY4 272 aaPredicted RBP12.26□□□□□ -0.45
APOC1-208ENST00000592535 IKZF5Q9H5V7 419 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 ARMC7Q9H6L4 198 aa12.26□□□□□ -0.45
APOC1-208ENST00000592535 TMEM45AQ9NWC5 275 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms