RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 HLA-DPB1P04440 258 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 PNMTP11086 282 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 PEPDP12955 493 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 CFL1P23528 166 aaKnown RBP9.13□□□□□ -0.95
VPS25-202ENST00000589219 PPICP45877 212 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 RNF144AP50876 292 aaPredicted RBP9.13□□□□□ -0.95
VPS25-202ENST00000589219 RPS25P62851 125 aaKnown RBP9.13□□□□□ -0.95
VPS25-202ENST00000589219 IFITM3Q01628 133 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 CRYZQ08257 329 aaKnown RBP9.13□□□□□ -0.95
VPS25-202ENST00000589219 CDC20Q12834 499 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 COL9A2Q14055 689 aaPredicted RBP9.13□□□□□ -0.95
VPS25-202ENST00000589219 SHBQ15464 509 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 TRAM1Q15629 374 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 ISXQ2M1V0 245 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 FNDC7Q5VTL7 733 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 ZNF322Q6U7Q0 402 aaPredicted RBP9.13□□□□□ -0.95
VPS25-202ENST00000589219 RTL4Q6ZR62 310 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 SHFQ7M4L6 423 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 OAFQ86UD1 273 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 LYSMD2Q8IV50 215 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 GPALPP1Q8IXQ4 340 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 CADM2Q8N3J6 435 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 PARP16Q8N5Y8 322 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 EID2Q8N6I1 236 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 SIRT6Q8N6T7 355 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 ATP6V1C2Q8NEY4 427 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 OR4F15Q8NGB8 312 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 OR51G2Q8NGK0 314 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 OR4C6Q8NH72 309 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 OR14A16Q8NHC5 309 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 GATAD2BQ8WXI9 593 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 KISS1RQ969F8 398 aaPredicted RBP9.13□□□□□ -0.95
VPS25-202ENST00000589219 TRMT61AQ96FX7 289 aaKnown RBP9.13□□□□□ -0.95
VPS25-202ENST00000589219 SLC41A2Q96JW4 573 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 PTCHD1Q96NR3 888 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 SECISBP2Q96T21 854 aaKnown RBP9.13□□□□□ -0.95
VPS25-202ENST00000589219 ZNF649Q9BS31 505 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 NDC1Q9BTX1 674 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 C12orf10Q9HB07 376 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 MCCC2Q9HCC0 563 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 TRIM36Q9NQ86 728 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 UBQLN4Q9NRR5 601 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 UCKL1Q9NWZ5 548 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 HAO2Q9NYQ3 351 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 SRPK3Q9UPE1 567 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 CMAHPQ9Y471 501 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 TDRD6O60522 2096 aaKnown RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 URB1O60287 2271 aaKnown RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 SCN3AQ9NY46 2000 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 TRAV27A0A087WT01 109 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 A0A1B0GX78 115 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 OR6C76A6NM76 312 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 C12orf71A8MTZ7 269 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 WWP2O00308 870 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SCDO00767 359 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 PLD2O14939 933 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 TOX3O15405 576 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 TBX1O43435 398 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 OR7A10O76100 309 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 CDRT1O95170 752 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 PPP1R3DO95685 299 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 HNRNPCP07910 306 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS25-202ENST00000589219 UBL4AP11441 157 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 HPGDP15428 266 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 PTNP21246 168 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SLC2A5P22732 501 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 CSF2RBP32927 897 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 RPS19P39019 145 aaKnown RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 RANBP1P43487 201 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SLC6A8P48029 635 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 PSMD7P51665 324 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SLC37A1P57057 533 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 OR1D5P58170 312 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 LGALS3BPQ08380 585 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 ERV3-1Q14264 604 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 GALEQ14376 348 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 NNATQ16517 81 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 ZNF791Q3KP31 576 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 TBC1D25Q3MII6 688 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 CRTC2Q53ET0 693 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 KLHL26Q53HC5 615 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 ARHGAP40Q5TG30 622 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 AGAP7PQ5VUJ5 663 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 NKAIN2Q5VXU1 208 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 C22orf42Q6IC83 251 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 WBP2NLQ6ICG8 309 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 WDR74Q6RFH5 385 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 THSD4Q6ZMP0 1018 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 TTLL10Q6ZVT0 673 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 TMEM151BQ8IW70 566 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SLC35F3Q8IY50 421 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 POMGNT2Q8NAT1 580 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SLC37A3Q8NCC5 494 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 OR1L3Q8NH93 324 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SETD6Q8TBK2 473 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 PTPMT1Q8WUK0 201 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 SPRYD4Q8WW59 207 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 KIAA1143Q96AT1 154 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 C3orf49Q96BT1 292 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms