RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ARRDC2Q8TBH0 407 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 LGALS14Q8TCE9 139 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 RBMXL1Q96E39 390 aaKnown RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 H0YIV9 168 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SLC16A7O60669 478 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 HBQ1P09105 142 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 PCSK6P29122 969 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SERPINF1P36955 418 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 TLE4Q04727 773 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 RAB33AQ14088 237 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 RBMS3Q6XE24 437 aaKnown RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 PELI3Q8N2H9 469 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 FAM160A2Q8N612 972 aaPredicted RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 OR4K15Q8NH41 348 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 OR52N1Q8NH53 320 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 FOXJ1Q92949 421 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 UPRTQ96BW1 309 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SORBS1Q9BX66 1292 aaKnown RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 MCOLN1Q9GZU1 580 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 A0A0B4J2A0 478 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 AGAP14A8MT82 685 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 CSO75390 466 aaKnown RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 HOXC5Q00444 222 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 C1orf61Q13536 156 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 GPR176Q14439 515 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SLC9A3R2Q15599 337 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 ZNF534Q76KX8 674 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 ABHD4Q8TB40 342 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SLC35B4Q969S0 331 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 MARC2Q969Z3 335 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SLC6A20Q9NP91 592 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SHPKQ9UHJ6 478 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 PUS1Q9Y606 427 aaKnown RBP eCLIP12.19□□□□□ -0.46
RNF43-208ENST00000584437 TCRBV21S2A2A0A5A6 115 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 M6PRP20645 277 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 GABRR1P24046 479 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 LRRTM3Q86VH5 581 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SIAH3Q8IW03 269 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 GCDHQ92947 438 aaPredicted RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 TSACCQ96A04 125 aaPredicted RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 RADILQ96JH8 1075 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 PKMYT1Q99640 499 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 PAPOLGQ9BWT3 736 aaKnown RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 GSX2Q9BZM3 304 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 ZNF286AQ9HBT8 521 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SDHAF2Q9NX18 166 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 RARRES3Q9UL19 164 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.18□□□□□ -0.46
RNF43-208ENST00000584437 LOC102725191A0A1B0GVB3 256 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 JMJD7P0C870 316 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 ELK1P19419 428 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 CCR9P51686 369 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SOHLH1Q5JUK2 328 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 MAVSQ7Z434 540 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 GHSRQ92847 366 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SGK3Q96BR1 496 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 ANKRD19PQ9H560 264 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SLC9B1P1A6NJY1 282 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 C17orf105B2RV13 164 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SEC14L5O43304 696 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SCAF4O95104 1147 aaKnown RBP12.18□□□□□ -0.46
RNF43-208ENST00000584437 PMS2P2O95744 297 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SCGB1D1O95968 90 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 ETV5P41161 510 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 FOXK1P85037 733 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 ACSM1Q08AH1 577 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SF3B4Q15427 424 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■■□□□ 14.5
RNF43-208ENST00000584437 RAB30Q15771 203 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 Q499Y3 187 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
RNF43-208ENST00000584437 KLHDC8BQ8IXV7 354 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 ZNF480Q8WV37 535 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 OCSTAMPQ9BR26 566 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 CDH20Q9HBT6 801 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 PLEKHM1Q9Y4G2 1056 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 ATP6V1G2-DDX39BF2Z307 99 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 HTR1FP30939 366 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 TGM4P49221 684 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SRPXP78539 464 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 KCTD11Q693B1 232 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 TANGO2Q6ICL3 276 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 TECPR1Q7Z6L1 1165 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 TMEM25Q86YD3 366 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 TAAR8Q969N4 342 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 OR5M11Q96RB7 305 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SLC25A21Q9BQT8 299 aaPredicted RBP12.18□□□□□ -0.46
RNF43-208ENST00000584437 PIGMQ9H3S5 423 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SCML1Q9UN30 329 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 USP22Q9UPT9 525 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 NPFFR2Q9Y5X5 522 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 A0A0J9YY10 115 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 PIP5K1CO60331 668 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 MAGEB1P43366 347 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 RABIFP47224 123 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 ATP1B3P54709 279 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 ASAH1Q13510 395 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 SLX4IPQ5VYV7 408 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 LPCAT3Q6P1A2 487 aa12.18□□□□□ -0.46
RNF43-208ENST00000584437 MBOAT2Q6ZWT7 520 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms