RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 LILRA2Q8N149 483 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 FAM83FQ8NEG4 500 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 OR4C15Q8NGM1 316 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 OR6S1Q8NH40 331 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 SPATA3Q8NHX4 192 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ZNF563Q8TA94 476 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 STK35Q8TDR2 534 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 LIPHQ8WWY8 451 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 STMN2Q93045 179 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CENPNQ96H22 339 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 PIGQQ9BRB3 760 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 TMUB1Q9BVT8 246 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 FNDC11Q9BVV2 318 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 OSBPL10Q9BXB5 764 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 POTEKPQ9BYX7 375 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 C6orf203Q9P0P8 240 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 NTNG1Q9Y2I2 539 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 LYVE1Q9Y5Y7 322 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 V9GYQ6 96 aa10.05□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CPSF4LA6NMK7 179 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 TIPRLO75663 272 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 GADD45GO95257 159 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 NUDT14O95848 222 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 HK1P19367 917 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 FUT4P22083 530 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 TACR3P29371 465 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 RRM2P31350 389 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 DNAJA1P31689 397 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 MAGEA5P43359 124 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CTBP2P56545 445 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 EGR4Q05215 589 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 MERTKQ12866 999 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 KRTCAP3Q53RY4 240 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CMPK2Q5EBM0 449 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ZNF770Q6IQ21 691 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 HMBOX1Q6NT76 420 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 NKAIN4Q8IVV8 208 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 PQLC1Q8N2U9 271 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 TMCO5AQ8N6Q1 288 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 NEIL3Q8TAT5 605 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 SLC7A13Q8TCU3 470 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 SLC25A43Q8WUT9 341 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ACOT11Q8WXI4 607 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 LRTOMTQ8WZ04 291 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 JSRP1Q96MG2 331 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 NPAS1Q99742 590 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 RPS6KB2Q9UBS0 482 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 SLC7A7Q9UM01 511 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 AP4B1Q9Y6B7 739 aa10.04□□□□□ -0.8
CDK5RAP3-204ENST00000577664 A0A087WUU8 490 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 TMED7-TICAM2A0A0A6YYA0 188 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 SH3PXD2BA1X283 911 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 OR2M5A3KFT3 312 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 FAM221AA4D161 298 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 A8MVM7 634 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 FAM47E-STBD1D6RA91 191 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 PRSS44E7EML9 344 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 H0YHG0 523 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CASQ2O14958 399 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 DIRAS1O95057 198 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ACTL6AO96019 429 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ANPEPP15144 967 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CPN1P15169 458 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ZNF24P17028 368 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 GDF1P27539 372 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 YAP1P46937 504 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ERFP50548 548 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CCR4P51679 360 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 PLGLB1Q02325 96 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 SELENBP1Q13228 472 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 MICAQ29983 383 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.03□□□□□ -0.84e-6■■□□□ 12.5
CDK5RAP3-204ENST00000577664 VASNQ6EMK4 673 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 SHQ1Q6PI26 577 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CSPG4Q6UVK1 2322 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 WDR88Q6ZMY6 472 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ALPK1Q96QP1 1244 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 PKP2Q99959 881 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 RASSF4Q9H2L5 321 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 REEP1Q9H902 201 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 RNPEPL1Q9HAU8 725 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CTPS2Q9NRF8 586 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 SERINC1Q9NRX5 453 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 SELENONQ9NZV5 590 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 STOML1Q9UBI4 398 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 CHRNA9Q9UGM1 479 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 VDAC3Q9Y277 283 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 TRAPPC4Q9Y296 219 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 TMED7Q9Y3B3 224 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 ZNF337Q9Y3M9 751 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 NCKAP5O14513 1909 aa10.03□□□□□ -0.8
CDK5RAP3-204ENST00000577664 STAB1Q9NY15 2570 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 IGKV1D-42A0A075B6H8 117 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 OR14I1A6ND48 311 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TNFRSF11BO00300 401 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 AQP7O14520 342 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 MT-ND1P03886 318 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TSPAN19P0C672 248 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FPR1P21462 350 aa10.02□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CXCR1P25024 350 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms