RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ACTR1AP61163 376 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 HERVK_113P61574 105 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 NTHL1P78549 312 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 PAX5Q02548 391 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 GRB7Q14451 532 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 TAF7Q15545 349 aaPredicted RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 SLC25A52Q3SY17 297 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 HSP90AA5PQ58FG0 334 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 OR2G6Q5TZ20 316 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 TTC23Q5W5X9 447 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 LRRC8BQ6P9F7 803 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 SYT10Q6XYQ8 523 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 PPP1R42Q7Z4L9 355 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 DHDDSQ86SQ9 333 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 LINC01551Q86U37 167 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 LCA5Q86VQ0 697 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 ZCCHC7Q8N3Z6 543 aaKnown RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 FAM71E2Q8N5Q1 922 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 ARL6IP6Q8N6S5 226 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 ANKFN1Q8N957 763 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 OR4D9Q8NGE8 314 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 OR4D5Q8NGN0 318 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 OR56B4Q8NH76 319 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 SLC5A11Q8WWX8 675 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 IL1F10Q8WWZ1 152 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 CTNNBL1Q8WYA6 563 aaPredicted RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 RPUSD4Q96CM3 377 aaKnown RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 SH3YL1Q96HL8 342 aaPredicted RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 AKR1E2Q96JD6 320 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 MTMR9Q96QG7 549 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 CCNL2Q96S94 520 aaPredicted RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 GPA33Q99795 319 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 KLHDC3Q9BQ90 382 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF670Q9BS34 389 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 SRXN1Q9BYN0 137 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 PPDPFQ9H3Y8 114 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 FANCFQ9NPI8 374 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 SLC17A5Q9NRA2 495 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 HOXC10Q9NYD6 342 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF225Q9UK10 706 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 CLEC4AQ9UMR7 237 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 UBQLN1Q9UMX0 589 aaKnown RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 ASB3Q9Y575 518 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 COL1A2P08123 1366 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 IGLV4-69A0A075B6H9 119 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 IGHV3-64DA0A0J9YX35 117 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 A0A1B0GWB2 263 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 CLDN5O00501 218 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 RS1O15537 224 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 RIPK2O43353 540 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 DFNA5O60443 496 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 NOL3O60936 208 aaKnown RBP1.3□□□□□ -2.2
TOP2A-202ENST00000577541 MTX2O75431 263 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 KIAA0754O94854 1291 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 GAPDHP04406 335 aaKnown RBP1.3□□□□□ -2.2
TOP2A-202ENST00000577541 RBMY1CP0DJD4 496 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 TNNI3P19429 210 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 PGCP20142 388 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 MAGP20916 626 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 GLRA2P23416 452 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 ATP5A1P25705 553 aaKnown RBP1.3□□□□□ -2.2
TOP2A-202ENST00000577541 CD80P33681 288 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 BTCP35070 178 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 GCKP35557 465 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 CHI3L1P36222 383 aaPredicted RBP1.3□□□□□ -2.2
TOP2A-202ENST00000577541 PTGDSP41222 190 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 TFPI2P48307 235 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 LHX2P50458 406 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 PPT1P50897 306 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 NAPAP54920 295 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 APOC4P55056 127 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 BIDP55957 195 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 CBX1P83916 185 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 RAB40BQ12829 278 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 IL24Q13007 206 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 GPM6BQ13491 265 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 NDUFA9Q16795 377 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 ATL3Q6DD88 541 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 OR8G2PQ6IF36 304 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 UNQ9370/PRO34162Q6UXP9 181 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 RGS9BPQ6ZS82 235 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 FAM220AQ7Z4H9 259 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 ACOT1Q86TX2 421 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF429Q86V71 674 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 TMEM17Q86X19 198 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF679Q8IYX0 411 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 C6orf223Q8N319 242 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 ZSCAN4Q8NAM6 433 aaPredicted RBP1.3□□□□□ -2.2
TOP2A-202ENST00000577541 STEAP2Q8NFT2 490 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 OR5D13Q8NGL4 314 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF606Q8WXB4 792 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 CHCHD10Q8WYQ3 142 aaPredicted RBP1.3□□□□□ -2.2
TOP2A-202ENST00000577541 EMG1Q92979 244 aaKnown RBP1.3□□□□□ -2.2
TOP2A-202ENST00000577541 OXGR1Q96P68 337 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 TGM7Q96PF1 710 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 OR5B2Q96R09 309 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 RIT2Q99578 217 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 SLC30A2Q9BRI3 323 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 SPATA16Q9BXB7 569 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 POLR1EQ9GZS1 481 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms