RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 UGT2B10P36537 528 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 OR2B6P58173 313 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 EXOC3L2Q2M3D2 409 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 BEND4Q6ZU67 534 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 RP9Q8TA86 221 aaKnown RBP20.93■□□□□ 0.94
SNF8-217ENST00000576353 ELAC2Q9BQ52 826 aaKnown RBP20.93■□□□□ 0.94
SNF8-217ENST00000576353 ECSITQ9BQ95 431 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 PSD2Q9BQI7 771 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 POTEKPQ9BYX7 375 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 NSRP1Q9H0G5 558 aaKnown RBP20.93■□□□□ 0.94
SNF8-217ENST00000576353 C12orf49Q9H741 205 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 EVA1AQ9H8M9 152 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 TEX15Q9BXT5 2789 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 APCP25054 2843 aa20.93■□□□□ 0.94
SNF8-217ENST00000576353 A6NNC1 897 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 ZNF724A8MTY0 619 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 DYNC1I1O14576 645 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 CASKO14936 926 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 FRS3O43559 492 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 EIF1BO60739 113 aaKnown RBP20.92■□□□□ 0.94
SNF8-217ENST00000576353 CTAG2O75638 210 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 MFN2O95140 757 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 PCGF2P35227 344 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 SEC24CP53992 1094 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 PCBP3P57721 371 aaKnown RBP20.92■□□□□ 0.94
SNF8-217ENST00000576353 SLC35A1P78382 337 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 HOXC5Q00444 222 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 PDK3Q15120 406 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 INTS11Q5TA45 600 aaKnown RBP20.92■□□□□ 0.94
SNF8-217ENST00000576353 PATL1Q86TB9 770 aaKnown RBP20.92■□□□□ 0.94
SNF8-217ENST00000576353 RPS6KB2Q9UBS0 482 aa20.92■□□□□ 0.94
SNF8-217ENST00000576353 A8MVM7 634 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 M0QX08 132 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 FXYD1O00168 92 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 TPST1O60507 370 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 GOSR1O95249 250 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 LSP1P33241 339 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 KRTAP10-9P60411 292 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 RABL3Q5HYI8 236 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 NUFIP2Q7Z417 695 aaKnown RBP20.91■□□□□ 0.94
SNF8-217ENST00000576353 LSMEM1Q8N8F7 131 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 PIGXQ8TBF5 258 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 C3orf49Q96BT1 292 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 NAA11Q9BSU3 229 aaPredicted RBP20.91■□□□□ 0.94
SNF8-217ENST00000576353 RSPO3Q9BXY4 272 aaPredicted RBP20.91■□□□□ 0.94
SNF8-217ENST00000576353 TRIM2Q9C040 744 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 KLHL4Q9C0H6 718 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 EMC3Q9P0I2 261 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 ING1Q9UK53 422 aaPredicted RBP20.91■□□□□ 0.94
SNF8-217ENST00000576353 FBN2P35556 2912 aa20.91■□□□□ 0.94
SNF8-217ENST00000576353 ZC3H12DA2A288 527 aaKnown RBP20.9■□□□□ 0.94
SNF8-217ENST00000576353 FAM221AA4D161 298 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 GMNCA6NCL1 334 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 KLK2P20151 261 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 IDUAP35475 653 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 GZMMP51124 257 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 VMACQ2NL98 169 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 ABLIM2Q6H8Q1 611 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 CPLX4Q7Z7G2 160 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 ATG4DQ86TL0 474 aaPredicted RBP20.9■□□□□ 0.94
SNF8-217ENST00000576353 DNAJA3Q96EY1 480 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 PIF1Q9H611 641 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 RASSF1Q9NS23 344 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 TESMINQ9Y4I5 508 aa20.9■□□□□ 0.94
SNF8-217ENST00000576353 DCHS2Q6V1P9 2916 aa20.89■□□□□ 0.94
SNF8-217ENST00000576353 IGKV3D-15A0A087WSY6 115 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 GPIP06744 558 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 C8BP07358 591 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 IMPDH2P12268 514 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 FPR1P21462 350 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 RGS8P57771 180 aaPredicted RBP20.89■□□□□ 0.93
SNF8-217ENST00000576353 NCALDP61601 193 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 H3F3AP84243 136 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 DMTNQ08495 405 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 GLIPR1L2Q4G1C9 344 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 TFAP2EQ6VUC0 442 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 GALNT5Q7Z7M9 940 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 COMTD1Q86VU5 262 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 SMYD1Q8NB12 490 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 OR52E4Q8NGH9 312 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 STK35Q8TDR2 534 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 DNAJA4Q8WW22 397 aaPredicted RBP20.89■□□□□ 0.93
SNF8-217ENST00000576353 WFIKKN1Q96NZ8 548 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 GPATCH1Q9BRR8 931 aaKnown RBP20.89■□□□□ 0.93
SNF8-217ENST00000576353 MED18Q9BUE0 208 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 POLDIP3Q9BY77 421 aaKnown RBP20.89■□□□□ 0.93
SNF8-217ENST00000576353 FAM107BQ9H098 131 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 C12orf10Q9HB07 376 aa20.89■□□□□ 0.93
SNF8-217ENST00000576353 TESQ9UGI8 421 aaKnown RBP20.89■□□□□ 0.93
SNF8-217ENST00000576353 ELOA3DA6NLF2 546 aaPredicted RBP20.88■□□□□ 0.93
SNF8-217ENST00000576353 GPR171O14626 319 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 GCM2O75603 506 aaPredicted RBP20.88■□□□□ 0.93
SNF8-217ENST00000576353 COX4I1P13073 169 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 PPP3CBP16298 524 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 BNIP2Q12982 314 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 ELOA3BQ3SY89 546 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 FBXW10Q5XX13 1052 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 ERICH5Q6P6B1 374 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 CALHM3Q86XJ0 350 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 POU5F2Q8N7G0 328 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms