RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 NDUFAF6Q330K2 333 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 RFTN2Q52LD8 501 aaPredicted RBP11.15□□□□□ -0.62
RNF40-208ENST00000565995 SYT14P1Q58G82 188 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 SZRD1Q7Z422 152 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 R3HCC1LQ7Z5L2 792 aaKnown RBP11.15□□□□□ -0.62
RNF40-208ENST00000565995 UBE2J2Q8N2K1 259 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 ADAMTS15Q8TE58 950 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 ZFAND2BQ8WV99 257 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 TMEM234Q8WY98 164 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 JADE3Q92613 823 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 C1orf159Q96HA4 380 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 SDF2Q99470 211 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 SOX7Q9BT81 388 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 THUMPD3Q9BV44 507 aaKnown RBP11.15□□□□□ -0.62
RNF40-208ENST00000565995 ADAM19Q9H013 955 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 FAM107BQ9H098 131 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 NSRP1Q9H0G5 558 aaKnown RBP11.15□□□□□ -0.62
RNF40-208ENST00000565995 SLCO1B3Q9NPD5 702 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 SLC17A5Q9NRA2 495 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 MARCOQ9UEW3 520 aaPredicted RBP11.15□□□□□ -0.62
RNF40-208ENST00000565995 BAIAP2L1Q9UHR4 511 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 A0A0A6YYJ9 748 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 SERINC4A6NH21 518 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 SLCO1B7G3V0H7 640 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 SPRY1O43609 319 aaPredicted RBP11.14□□□□□ -0.63
RNF40-208ENST00000565995 MRPL33O75394 65 aaKnown RBP11.14□□□□□ -0.63
RNF40-208ENST00000565995 SNUPNO95149 360 aaKnown RBP11.14□□□□□ -0.63
RNF40-208ENST00000565995 IGHV3-9P01782 118 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 TACSTD2P09758 323 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 KITP10721 976 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 DDX5P17844 614 aaKnown RBP11.14□□□□□ -0.63
RNF40-208ENST00000565995 PAX7P23759 505 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 LSP1P33241 339 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 APOBEC1P41238 236 aaKnown RBP11.14□□□□□ -0.63
RNF40-208ENST00000565995 CCT3P49368 545 aaKnown RBP11.14□□□□□ -0.63
RNF40-208ENST00000565995 SLC25A3Q00325 362 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 DEF8Q6ZN54 512 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 HOMEZQ8IX15 550 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 ZNF781Q8N8C0 355 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 OR56A1Q8NGH5 318 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 OR2T11Q8NH01 316 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 PIGXQ8TBF5 258 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 SFXN5Q8TD22 340 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 OIT3Q8WWZ8 545 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 HPS1Q92902 700 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 MOAP1Q96BY2 351 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 CHMP6Q96FZ7 201 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 C7orf26Q96N11 449 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 TSSK3Q96PN8 268 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 CCDC106Q9BWC9 280 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 QRSL1Q9H0R6 528 aaKnown RBP11.14□□□□□ -0.63
RNF40-208ENST00000565995 CCDC134Q9H6E4 229 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 FGFR1OP2Q9NVK5 253 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 KCNE5Q9UJ90 142 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 TRAPPC4Q9Y296 219 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 HDGFL3Q9Y3E1 203 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 RAP2CQ9Y3L5 183 aa11.14□□□□□ -0.63
RNF40-208ENST00000565995 ANKRD28O15084 1053 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 LSM1O15116 133 aaKnown RBP11.13□□□□□ -0.63
RNF40-208ENST00000565995 SNNO75324 88 aaPredicted RBP11.13□□□□□ -0.63
RNF40-208ENST00000565995 SKAP2O75563 359 aaPredicted RBP11.13□□□□□ -0.63
RNF40-208ENST00000565995 PDE5AO76074 875 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 CHEK2O96017 543 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 GUSBP08236 651 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 BCKDHAP12694 445 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 ITGA2P17301 1181 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 PGCP20142 388 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 ARRB2P32121 409 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 COMPP49747 757 aaPredicted RBP11.13□□□□□ -0.63
RNF40-208ENST00000565995 RNF144AP50876 292 aaPredicted RBP11.13□□□□□ -0.63
RNF40-208ENST00000565995 PDZK1Q5T2W1 519 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 LRRC34Q8IZ02 419 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 KIRREL3Q8IZU9 778 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 NATD1Q8N6N6 113 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 FAM71CQ8NEG0 241 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 RFWD2Q8NHY2 731 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 OR5P2Q8WZ92 322 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 FBXO17Q96EF6 278 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 ZHX1-C8orf76Q96EF9 292 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 SORT1Q99523 831 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 C1QTNF6Q9BXI9 259 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 TUBB1Q9H4B7 451 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 PARPBPQ9NWS1 579 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 TMEFF2Q9UIK5 374 aaPredicted RBP11.13□□□□□ -0.63
RNF40-208ENST00000565995 FBXO9Q9UK97 447 aaPredicted RBP11.13□□□□□ -0.63
RNF40-208ENST00000565995 FAF1Q9UNN5 650 aaPredicted RBP11.13□□□□□ -0.63
RNF40-208ENST00000565995 TRAF6Q9Y4K3 522 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 PTGDR2Q9Y5Y4 395 aa11.13□□□□□ -0.63
RNF40-208ENST00000565995 WNK2Q9Y3S1 2297 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 TMEM233B4DJY2 109 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 B9A039 149 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 ATP6V1G2-DDX39BF2Z307 99 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 AZIN1O14977 448 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 SCAMP2O15127 329 aaKnown RBP11.12□□□□□ -0.63
RNF40-208ENST00000565995 KIAA0513O60268 411 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 EDF1O60869 148 aaKnown RBP11.12□□□□□ -0.63
RNF40-208ENST00000565995 TROVE2P10155 538 aaKnown RBP eCLIP11.12□□□□□ -0.63
RNF40-208ENST00000565995 EFNA1P20827 205 aaPredicted RBP11.12□□□□□ -0.63
RNF40-208ENST00000565995 SERPINF1P36955 418 aa11.12□□□□□ -0.63
RNF40-208ENST00000565995 RPL3P39023 403 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms