RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PHF21AQ96BD5 680 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PCED1BQ96HM7 432 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 RNF145Q96MT1 663 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 MUS81Q96NY9 551 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 CTRCQ99895 268 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 WACQ9BTA9 647 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 FUNDC2Q9BWH2 189 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ZYG11BQ9C0D3 744 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 POLR1EQ9GZS1 481 aaKnown RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SYNDIG1Q9H7V2 258 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SIAEQ9HAT2 523 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 NLE1Q9NVX2 485 aaPredicted RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SLC2A6Q9UGQ3 507 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PCTPQ9UKL6 214 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 EIF3LQ9Y262 564 aaKnown RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 AMDHD2Q9Y303 409 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 FIS1Q9Y3D6 152 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 CFAP54Q96N23 3096 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 MYLKQ15746 1914 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ELOVL7A1L3X0 281 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 FAM90A10PA6NDY2 464 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 PRAC2D3DTV9 90 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 H3BMM5 538 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SLC1A7O00341 560 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 LSM1O15116 133 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 LATO43561 262 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 OTCP00480 354 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 IGHV4-34P06331 123 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 THEGLP0DJG4 465 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 PCMT1P22061 227 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 AKT2P31751 481 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 MAGEA2P43356 314 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ZFP36L2P47974 494 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 EIF2B2P49770 351 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF415Q09FC8 603 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 KLRB1Q12918 225 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 GRB7Q14451 532 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TTLL9Q3SXZ7 439 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 C6orf136Q5SQH8 315 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SULT1C3Q6IMI6 304 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 CAPN13Q6MZZ7 669 aaPredicted RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 PTAR1Q7Z6K3 402 aaPredicted RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TMPRSS11BQ86T26 416 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ADCK1Q86TW2 530 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 Q8N9P0 234 aaPredicted RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 OR2T12Q8NG77 320 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 UBTD2Q8WUN7 234 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 STARD8Q92502 1023 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 FAM131CQ96AQ9 280 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 YIPF6Q96EC8 236 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SLC47A1Q96FL8 570 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 CELF6Q96J87 481 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 RACGAP1Q9H0H5 632 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TUBB1Q9H4B7 451 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 DUSP21Q9H596 190 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 KAT8Q9H7Z6 458 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 NTN4Q9HB63 628 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 EQTNQ9NQ60 294 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 INIPQ9NRY2 104 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 CCDC59Q9P031 241 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 WARS2Q9UGM6 360 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ENOPH1Q9UHY7 261 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SAMD4AQ9UPU9 718 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TDRKHQ9Y2W6 561 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 IFT52Q9Y366 437 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SPIN1Q9Y657 262 aaPredicted RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SCN1AP35498 2009 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ANKRD36A6QL64 1941 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 EDDM13A0A1B0GTR0 161 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 LOC100130705A0A1B0GUX0 176 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 CENPBD1B2RD01 187 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 H7C0S8 307 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 CLDN5O00501 218 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 GNGT2O14610 69 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 BCKDKO14874 412 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SSX4O60224 188 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 CST1P01037 141 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TRAPPC2P0DI81 140 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TRAPPC2BP0DI82 140 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 NCF1P14598 390 aaPredicted RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 NELFEP18615 380 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 POLR2EP19388 210 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 EFNA1P20827 205 aaPredicted RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 CCKBRP32239 447 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 HPCAL1P37235 193 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 DEFA1P59665 94 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 DEFA3P59666 94 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 PRKCDQ05655 676 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 MZT1Q08AG7 82 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 LRRC74AQ0VAA2 488 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TAF1AQ15573 450 aaPredicted RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 IZUMO4Q1ZYL8 232 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ANKDD1AQ495B1 522 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SIRPB2Q5JXA9 342 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SDHAF4Q5VUM1 108 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 LYPLAL1Q5VWZ2 237 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ZDHHC20Q5W0Z9 365 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TMEM53Q6P2H8 277 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TMEM207Q6UWW9 146 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 DLEU7Q6UYE1 221 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms