RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 LRCH1Q9Y2L9 728 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 CSAG2Q9Y5P2 127 aa9.2□□□□□ -0.94
SMG1-208ENST00000563448 A0A087WZY1 265 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 EFCAB9A8MZ26 197 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 FAM47E-STBD1D6RA91 191 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 BCKDKO14874 412 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 RRP8O43159 456 aaKnown RBP9.19□□□□□ -0.94
SMG1-208ENST00000563448 NPIPB7O75200 414 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 IGF2P01344 180 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 HK1P19367 917 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 FXYD6P3P58550 94 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 LTBQ06643 244 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 FHL1Q13642 323 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 KEAP1Q14145 624 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 TMEM44Q2T9K0 475 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 ZNF691Q5VV52 312 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 C1QL3Q5VWW1 255 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 TMEM236Q5W0B7 351 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 GALNTL5Q7Z4T8 443 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 OR8D4Q8NGM9 314 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 OR13C2Q8NGS9 318 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 TAAR8Q969N4 342 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 ZBTB8AQ96BR9 441 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 SCMH1Q96GD3 660 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 HRASLS5Q96KN8 279 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 UBQLN3Q9H347 655 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 ZFP64Q9NPA5 681 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 CHRNA9Q9UGM1 479 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 ENOPH1Q9UHY7 261 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 RPH3AQ9Y2J0 694 aaPredicted RBP9.19□□□□□ -0.94
SMG1-208ENST00000563448 RAXQ9Y2V3 346 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 ZAR1LA6NP61 321 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 A8MVM7 634 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 H3BN98 237 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 K7ENP7 123 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 PTP4A3O75365 173 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 OR7A10O76100 309 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 CH25HO95992 272 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 SAGP10523 405 aaPredicted RBP9.19□□□□□ -0.94
SMG1-208ENST00000563448 CD46P15529 392 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 POU1F1P28069 291 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 ADH6P28332 368 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 SRD5A2P31213 254 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 RPS5P46782 204 aaKnown RBP9.19□□□□□ -0.94
SMG1-208ENST00000563448 TNFSF10P50591 281 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 PDK3Q15120 406 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 ZNF74Q16587 644 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 ZNF766Q5HY98 468 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 BROXQ5VW32 411 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 INO80CQ6PI98 192 aaPredicted RBP9.19□□□□□ -0.94
SMG1-208ENST00000563448 ZNF620Q6ZNG0 422 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 CCDC71Q8IV32 467 aaPredicted RBP9.19□□□□□ -0.94
SMG1-208ENST00000563448 LRRC17Q8N6Y2 441 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 STK35Q8TDR2 534 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 DNAJA3Q96EY1 480 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 C5orf34Q96MH7 638 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 MOGAT1Q96PD6 335 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 UBL7Q96S82 380 aaPredicted RBP9.19□□□□□ -0.94
SMG1-208ENST00000563448 PTDSS2Q9BVG9 487 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 OR11A1Q9GZK7 315 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 IL20Q9NYY1 176 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 DKKL1Q9UK85 242 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 BOKQ9UMX3 212 aaPredicted RBP9.19□□□□□ -0.94
SMG1-208ENST00000563448 SIGLEC7Q9Y286 467 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 KLF13Q9Y2Y9 288 aaPredicted RBP9.19□□□□□ -0.94
SMG1-208ENST00000563448 GMPPBQ9Y5P6 360 aa9.19□□□□□ -0.94
SMG1-208ENST00000563448 TRAV27A0A087WT01 109 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 HTR3EA5X5Y0 456 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 C1QTNF9BB2RNN3 333 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 TAF4O00268 1085 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 ZNF208O43345 1280 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 BGLAPP02818 100 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 C1QTNF9P0C862 333 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 GGT2P36268 569 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 EIF1P41567 113 aaKnown RBP9.18□□□□□ -0.94
SMG1-208ENST00000563448 CD97P48960 835 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 MEOX1P50221 254 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 IL18R1Q13478 541 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 C1orf140Q5VVS0 124 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 GTPBP8Q8N3Z3 284 aaPredicted RBP9.18□□□□□ -0.94
SMG1-208ENST00000563448 CLDN22Q8N7P3 220 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 ATP6V1C2Q8NEY4 427 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 LIPHQ8WWY8 451 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 RELTQ969Z4 430 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 TNFRSF13CQ96RJ3 184 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 ENKD1Q9H0I2 346 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 OR52D1Q9H346 318 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 MRPS18CQ9Y3D5 142 aaKnown RBP9.18□□□□□ -0.94
SMG1-208ENST00000563448 CDH10Q9Y6N8 788 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 ZNF407Q9C0G0 2248 aa9.18□□□□□ -0.94
SMG1-208ENST00000563448 TRAV36DV7A0A075B6V5 113 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 KLRC4-KLRK1H3BQV0 150 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 RFC3P40938 356 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 SLC9A3P48764 834 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 B3GALT5-AS1P59052 145 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 ISL1P61371 349 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 CDK5Q00535 292 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 GINS1Q14691 196 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 TOMM20Q15388 145 aa9.17□□□□□ -0.94
SMG1-208ENST00000563448 GLYR1Q49A26 553 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms